Gene Sdel_0976 details

Gene Information

• Locus tag: Sdel_0976
• ID: 8592513
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 981990
• End bp: 982604
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 38%
• Product: regulatory protein TetR
• Protein accession: YP_003304040
• Protein GI: 268679609

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00018682
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGGA TTATCGATAA AGAAGAAAAA CGGTGCGATA TTGCTCGTGC GGCGATTGAT 
CCTTTTTGTG AAAAAGGAAT TGCGCAGACG AGTATTGATG AAATTGCCAA AAGTTCAGGT 
GTGGCGAAGG GAACGGTGTA TCTTTATTTT AAGAACAAAG AAGAAATTAT CTTTGCGATT 
TGGGATATGC TCTCAAGACG CCATAAAGAG GAGTTTGAGA AGCGACTTCA TCCCTCAATG 
AGTGCGCAAG AAAAAATCTT AGCCTATTTT AATTTTAGTG AATGCGAAAA AGACCACGAC 
AAAGAGAAGA TGCTCACCCT TTATCAACAT TTTGTGAGCG CTATGCTTAT TGATAAAACA 
GGGCTTTACA CTGCTTATTT TGAAAGTTTT TTTCAAGAAG ATTTTGATTT TATTTCACAC 
TGTTTGGAAG AGGGTATCGC AAAAGGTGAA TTTGAGCTTG AAAATAGCGC ATTGCTAAGT 
AGCAGTATTA TTTTACTGCT TAAAGGCTTA CTCGTACGTG CCAAAGCCTC CAATATGGGA 
TTTTACGAAG CACAAAATCT CCTCTTTGAG CATGTTAAAT TTCTTTTAAA TCACGCCACA 
AGGAAGCATG GATGA 

 

Protein sequence

MARIIDKEEK RCDIARAAID PFCEKGIAQT SIDEIAKSSG VAKGTVYLYF KNKEEIIFAI 
WDMLSRRHKE EFEKRLHPSM SAQEKILAYF NFSECEKDHD KEKMLTLYQH FVSAMLIDKT 
GLYTAYFESF FQEDFDFISH CLEEGIAKGE FELENSALLS SSIILLLKGL LVRAKASNMG 
FYEAQNLLFE HVKFLLNHAT RKHG