| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0913 |
|---|
| Symbol | |
|---|
| ID | 8592449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | + |
|---|
| Start bp | 915080 |
|---|
| End bp | 921187 |
|---|
| Gene Length | 6108 bp |
|---|
| Protein Length | 2035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | PAS sensor protein |
|---|
| Protein accession | YP_003303978 |
|---|
| Protein GI | 268679547 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.271495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGT TATGGATAGT GCTTTGTGTT CCATTTTTCC TTTTTGGACA AGAAGCGTTG
GTGCTAAGCC ATCAAGAAAA AGTGTGGCTT AATGGACAAA AAGAGATTTA TATTGGGGCG
ATGGATGACT GGGCGCCTAT TAATTTTGTC GATTACCATG GAAAGGCTTC AGGTATTGGC
TCTGAAATTG TTGCGGAATT AAATAAGCTG TTAAAAGGGA AACTTAAAAT TGTCTCTGGC
AGTTGGGAAG AGATTTATAC CCAAGCTAAA GAGGGAAAGA TTGATGCGAT TATGGATATT
ACGAAAAAGC CTGAACGTGA GGCTTTTTTT TATTTTACCA AAGCGTATTT GAACATTCCT
CATGTCATTG TTTCTAGGCA AGATACTCCC TCTTTTGGCT CATTGGAGTC GTTGTACGGT
AAAAAAGTGG CATTGGAGAA AAATGTAGGT ACGATTGGGT ATTTGCGTAC GAATTTTCCT
TTTATTGAGA TTCAAACGTA TGATACAACC TCGATGGCAC TCCATGCATT AGCGATGAAA
GAGGTGGATG CGTATATCGG AAATCGTGCG GTGATGAGCT ATAAAATTGA ACAAGAATTT
TTAAACAGTT TAAAAATAGA CGCACTTGAA CGTAGCCGAA AAAGTGTACC GCTCTCGTTG
GGTGTTCCAA GGAGCAATCC AATGCTTTTT TCTATTTTGG AGAAGAGTAT GGAGGCGATT
CCTCGTGAGA CATGGGTCAA AATTCTCTCA AAATGGTCCA ATGAAAAACC TTTAAGTTTA
GATTTGACTT CTGAGGAGAG AGCGTATTTA AAGATGAAAA AGGAGCTTCG TTTTGTGGCG
GGCAATGAAG AATGGAAACC TTTTTCATTT TTAGATAAAA ATGGACAGAT GCAAGGTTTG
GAGAAGGATT TTTTAAAACT CTTAGAGTCC TATCTTTCCG TCCCTATTTA CGTGACACAT
CTTCCATGGG AAGATGCACT CAAACAGGCA AAATCACACC ATTTTGATGG CATTATCTCA
GCTTCTCCGA CGCCTGATCG ATTAGAAAAA CTCTCTTTTT CACATGCGTA TTATATTTCA
CCTTTAGCTG TTGTCACACG TCATGATAAT GTACGTGATA TCAATGAAAA TTTTGCTCAA
AAACGTATTG CGGTGATGGA GGGTAGTGCG GTTGTTTTAC ATGTAAAAGA GCATTTTCCT
GAGGCAAAAA TTGTCTATAC TAAAGAGGGT ACACAAGGGC TTATCACGAT GCTCTTAAAG
CGTGAGGCTG AAGGAGCGAT TGATACGATG CTTTCGCTTG AGTATCTTTT AAAGGAGAAA
TCCTTAGATG CGCAGGTGGA GATAGGATAT TCGTTTTACT CTGAAGCTTT AAGTAGTTTT
CAGTACGCCT TACGAAAGGA TGAGCCTTTG TTACTGAGTA TCATTAACAA AGCTATTGAT
GCGTATAGTT TGGATGAGCG TAAAAACATT AAGGAGCGTT GGGAAAGTAA AAATGGCAAT
GGTATGAAAA CGGTGTCGTT AAAAGGTGAG CAAAAGCCTT TGACAACGCT GAGTAAAGAA
GAGATTCAGT GGATTAAAGA GCATCCCATT ATCAAAGTTT CAAATGAGCC TGATTTTCCA
CCTTTTGACT TTATGAAAGA GGGAAGAGCT GTTGGTTTGG GTGTGGATTA TATGAACTTT
GTGGCACAAA AAGTAGGGTT ACATGTAAGC TATGTTCAAT CAACATGGGA GGATTTACTC
AAGCAGTTTG AAGCAGGGAA AATGGATGTT TTACAAAGTG TTTATCTCAC AAAAAAACGT
CAAGAGTATG CTTATTTTAC CACGCCATTT TTTACCAATT ATCCTGCTAT GGCAGTACGT
AAAGGAAGTT CAATTAAATC TTTAGCTGAG CTAAAAGGGA AAAAAGTTGC TCTAATGCGT
GGGTATGGGA CAAGTGAAAA ATTGCTGAGG GATATTCCTG AAATTAAGCC GATTATGTGT
ACAAATGTTT ATGAAGCCTT ACATTTGGTC AGTTTTGGCG AAGCCGATGT GGCTTTTGAT
AGTGTGGGAA CGATGAGTTA TGCGATTATG GAGCAGATGC TCACCAATCT GAGCATTCAT
AAAATTGATG TGAGCGATAA AGAACTTTCC AGTGATGTCC ATTTTGCGGT GAAAAAAGAG
AAAGCAATTT TGTATAGTAT TTTACAAAAA GCCTTAGATG CGATGACGCC AGAAGAGCAT
ATCGCATTGC GTAGTAAATG GGTTTTTAGC AATGAGACCA ATTTTCAAGC GGAGCAAAAA
TCGCATTTTC AACTGAGTTC TCAAGAAAAA GCGTGGCTCA AAGAGCACCC TATCCTTCTC
TTTACGGGAG ATCCTCGTTA TTTACCCTAT GAAGCATTTA ATAAAGAGGG TAAATACATA
GGGATTGTGG CTGATTTGCT GCAAAAGATG GAAAAAGAAC TAGGGATTCA TATAGAAAAA
GTTCCAAGTT TGACGTGGCA AGATGCCCTT TTAAAGGCAA AAAACAAAGA GGTCGATATG
ATCTCGGCGT ATGAAAACGA TAAAATCCTT AGTGAAACAC ATCTTTCCAC AAAGCCTTAT
GTCAGCAGTC CTTTGGTCAT TGTGACACGT AAAGACAAAC ACAAGTATTT TCTCAATTCT
CTCCTAGAGC TTGAAAATCA AAAAATCGCC ATTATAAAAG ATTACAGTTA TATTCAAGGG
CTCAAAGCGG CGTATCCAAA ATTGCATTAC ATGGAAGTTG AAAATGCGAA AAAAGGGTTT
GAAGGTGTTG CCTCAGGGGA ATACGATGCC ATGGTTGTTT CATTGCGGTT AGCAACCTAT
GCACTTCATA CGATGGGACT GCATAATTTG CATGTCATTG GAAAAACCGA TATGAATATG
CATTTGGCGT TCAATGTCAA AAAAGAGTGG GAGCCATTGG TGGGTATTTT AAACAAAGCC
ATCGCTGCTA TACCACCTGA GGAGCTTCAG CAAATCCTCA AACGCTGGGG ACCTGAAGAT
ATCGACACTC CTTTTGATAT GACGCTTTTT TTAGAGGTTG TTTCTTTTGC GCTCTTAGCG
CTTATAGCCC TTTTTTATTG GAACTATTTA CTTAAACGTC AAGTGGCGAG TAAAACGGCT
GAACTCTCCT CTTTGCTGAA ATCATTTGAT GCCCATGTCA TTGCTTCTAA GACGGATTTG
AAAGGGGTTA TTACCTATGT TTCGGATGCG TTTTGTCAGA TTAGCGGTTA TAAGCGTGAA
GAGCTGATGG GTAAAAATCA TCGTATTAGC AGACATCCTG ATAACGATGC GAAAATTTAT
GAAGAGATGT GGGCTGTCAT TACGCATGGG GGAGCGTGGA AAGGGCGTAT TAAAAATAAG
ACGAAAGAGG GTGGATATTA TTGGGTAGAT AGTGTGATTG AGCAAGAGCT TGATGCTTCA
GGAAAGGTGG TGGGTTACGC TGCGATTCGT CATGATGTAA CCGCTCATGT TGAGTTAGAA
GAGCTTAGTG AAAAGCTTGA GAGTATCGTA GAGAAACGAA CGCAAGATTT GGCGTTTTTA
AACAAAGAAC AACAAGCTAT TTTTGACTCG ACGAGCGTAG GTATTGTTCT TTTAAAAGAG
CGTTTGATTG TGCAGTGCAA TAAGCGCATT GATGAGATGT TAGGCTATAA AATAGGAGAA
CAACTTAACC AAAGTACGGA TATTTGGTAC CGTGAAATAC CTGATTATCA ATCCGTTTAT
GAACAGGTGT GGCATGGTGA AGTGGTTCGT TTTGAACATC GCTTAATGCG TAAAGATGGA
ACACTGTTTT GGGCAAGGCT ATCGGGTCGA GCGATTGATT ATTTGGATAA AGAAAAAGGT
GTGGTGGTAG TGGTTGAAGA TATTAGCACG GAGAAAGAAG CACTCGAAGC CATTCAAAGA
GCCAAATCTC TTGCAGAAGA AGCGACACAG GTTAAAAGTG CGTTTTTAGC CAATATGAGT
CATGAAATTC GTACTCCTAT GAATGCGATT ATTGGAATGG CGCATTTGGC ATTGCAGACA
GAACTTTCCA ATCAACAGCG CAATTATCTT GTAAAAATTG ACAGTGCTTC CAAACATCTT
TTAGGCATCA TCAATGATAT TTTGGATTTT TCAAAAATCG AAGCAGGTAA GATGCGTTTC
GAGTCGATTG ATTTTTATTT GGAAGATGTG ATGGAGCATT TAGCAGATCT TTCTGTGATG
AAAGCGCAAG AAAAAGGTTT GGAGCTTTTA TTTGATATTG AGACCAACAT CCCAACAGCC
CTCAGAGGTG ATCCCCTGCG TTTGGGACAA ATTTTGATTA ATCTGGTTAA TAACGCTATA
AAGTTTACCG CACAAGGAGA GATACGGCTT TTTGTAAAGC TACTGGCACA AGAAGCAAAA
CAGGTACATC TTTTATTTGA AGTACACGAT ACGGGCATTG GCATTGATGA AGCACAGCAG
GCAAAATTGT TTGAGGCATT TTCTCAAGCA GATTTATCGA CAACAAGAGA GTTTGGTGGT
TCAGGGTTAG GACTTGCGAT TTGTAAGCAT TTGGTTGAAA TGATGCAGGG AAAAATTTGG
GTTAAAAGCA CCCTAGGTGA AGGCAGTACT TTTTCCTTTA GCGCTCAGTT TGAATTGCAA
GAGGAGCAGA AAAAACCACA ATTTAATGAT GAGGATGTTC GCAATCTGCG TATTTTGATT
GTGGATGATA ATGCTAGTGC GAGAGAGATT TTAGAAAATA TCTTACGTTC GTTTCACTTT
AATGTTCACA GTGTCTGCGA TGGGCATCAT GCGTTGAGTC TTTTAAAAGA GGCGCAAAAA
GAGCCTCAGC CGTATAATTT AGTCTTAATT GATTGGATGA TGCCACAACT CAATGGGATT
GAGACGATTC GGAAAATTCG TGAAGAGATT GTGAGCGATC AGCCTTTAAT GTTTATTATG
ATTACAGCGT ACAGTAAAGA GGAGCTTCAA AAAGAGCTTG AAGAGCTTTT TGTGGATGGC
ATTTTGATTA AGCCTATTAG TCCTTCAACG CTTTTAAATA CCATTTTAAA TGTTCTTGGA
AAAGAGGTGA TGCGCCTTTC TCGCAAGGAA GATAAACAAG CGCTTTATCG TGAATCCATC
CATGCCCTTC GTGGTGCGAA AGTTTTACTG GTTGAAGATA ACATCATCAA TCAAGAAATA
GCCAAAGAGA TTTTAGAACG TGAAGGAATG GATATTGTCG TGGCAAACCA CGGTAAGGAA
GCATTGGAAT GGATAGAAAA AGAGTCTTTT GATGGTGTTT TAATGGATTG TCAAATGCCT
GTTATGGATG GGTTTGAAGC GACCCGTTTG ATGCGAGAAG GGGGTCATAC GCTTCCCATT
TTAGCCATGA CTGCCAATGC AATGGAGGGA GATAAAGAGC GTTGTTTGGC ATGTGGGATG
AATGACCATA TCAGTAAACC GATTGATATG GCAAAACTTT TTATAACCAT GGCAAAATGG
ATTGTTCCAT CCAATCCACG CCCTTTGAAG ATAATACAAA AAGAGGAGAG AGCAGATAGA
CCACTCTTAA ATGTTGAAGG TTTGGATATC GAAAAAGCAC TCTTACATGT CAATAACAAT
CACGCACTTT TAGAAACCCT GTGGCGTCGT TTTGTGGAAA CACAAGCAGA GTGTGCTGAA
CGTATTGAAG AGGCACTGCG TATAGGTGAT ACAGAAAAAG CGATGCGAGA AGCACATACC
CTTAAAGGTT TATCGGGCAA TATCGGTGCG AGGGAACTTT TTGAATCTTC TAAAAATTTA
GAGCATAGTT TAAAAGAGTC TTCAAGCGAT ATTCCTCTGT TTTTATGTCA AACAAAACAG
GATCTTGAAA CGGTCATAGC GCATTTAAAA GAGGCGTTTT TAGATGAAGC AACCCATAAA
GAAGTTTTGG ACTTTGAGGC AATTTTAACT CAAGAGGCAT TGCATGAAAA ATTAAATGAC
CTTGGGTATC TTTTGAAAGA ACTGGACTCT GAAGCGATTG ATGTCTTAGC GAATATTCGA
GCTTCATTGT TTCATTTAGG GTATAAAAAA GAAGTTGAAG AGATGGAAAA AGCACTTGCT
TCATTCGATT TTGAAAAAGC CTATGCACTA CTTAAGGAGA TAAAATAG
|
|---|
| Protein sequence | MKWLWIVLCV PFFLFGQEAL VLSHQEKVWL NGQKEIYIGA MDDWAPINFV DYHGKASGIG
SEIVAELNKL LKGKLKIVSG SWEEIYTQAK EGKIDAIMDI TKKPEREAFF YFTKAYLNIP
HVIVSRQDTP SFGSLESLYG KKVALEKNVG TIGYLRTNFP FIEIQTYDTT SMALHALAMK
EVDAYIGNRA VMSYKIEQEF LNSLKIDALE RSRKSVPLSL GVPRSNPMLF SILEKSMEAI
PRETWVKILS KWSNEKPLSL DLTSEERAYL KMKKELRFVA GNEEWKPFSF LDKNGQMQGL
EKDFLKLLES YLSVPIYVTH LPWEDALKQA KSHHFDGIIS ASPTPDRLEK LSFSHAYYIS
PLAVVTRHDN VRDINENFAQ KRIAVMEGSA VVLHVKEHFP EAKIVYTKEG TQGLITMLLK
REAEGAIDTM LSLEYLLKEK SLDAQVEIGY SFYSEALSSF QYALRKDEPL LLSIINKAID
AYSLDERKNI KERWESKNGN GMKTVSLKGE QKPLTTLSKE EIQWIKEHPI IKVSNEPDFP
PFDFMKEGRA VGLGVDYMNF VAQKVGLHVS YVQSTWEDLL KQFEAGKMDV LQSVYLTKKR
QEYAYFTTPF FTNYPAMAVR KGSSIKSLAE LKGKKVALMR GYGTSEKLLR DIPEIKPIMC
TNVYEALHLV SFGEADVAFD SVGTMSYAIM EQMLTNLSIH KIDVSDKELS SDVHFAVKKE
KAILYSILQK ALDAMTPEEH IALRSKWVFS NETNFQAEQK SHFQLSSQEK AWLKEHPILL
FTGDPRYLPY EAFNKEGKYI GIVADLLQKM EKELGIHIEK VPSLTWQDAL LKAKNKEVDM
ISAYENDKIL SETHLSTKPY VSSPLVIVTR KDKHKYFLNS LLELENQKIA IIKDYSYIQG
LKAAYPKLHY MEVENAKKGF EGVASGEYDA MVVSLRLATY ALHTMGLHNL HVIGKTDMNM
HLAFNVKKEW EPLVGILNKA IAAIPPEELQ QILKRWGPED IDTPFDMTLF LEVVSFALLA
LIALFYWNYL LKRQVASKTA ELSSLLKSFD AHVIASKTDL KGVITYVSDA FCQISGYKRE
ELMGKNHRIS RHPDNDAKIY EEMWAVITHG GAWKGRIKNK TKEGGYYWVD SVIEQELDAS
GKVVGYAAIR HDVTAHVELE ELSEKLESIV EKRTQDLAFL NKEQQAIFDS TSVGIVLLKE
RLIVQCNKRI DEMLGYKIGE QLNQSTDIWY REIPDYQSVY EQVWHGEVVR FEHRLMRKDG
TLFWARLSGR AIDYLDKEKG VVVVVEDIST EKEALEAIQR AKSLAEEATQ VKSAFLANMS
HEIRTPMNAI IGMAHLALQT ELSNQQRNYL VKIDSASKHL LGIINDILDF SKIEAGKMRF
ESIDFYLEDV MEHLADLSVM KAQEKGLELL FDIETNIPTA LRGDPLRLGQ ILINLVNNAI
KFTAQGEIRL FVKLLAQEAK QVHLLFEVHD TGIGIDEAQQ AKLFEAFSQA DLSTTREFGG
SGLGLAICKH LVEMMQGKIW VKSTLGEGST FSFSAQFELQ EEQKKPQFND EDVRNLRILI
VDDNASAREI LENILRSFHF NVHSVCDGHH ALSLLKEAQK EPQPYNLVLI DWMMPQLNGI
ETIRKIREEI VSDQPLMFIM ITAYSKEELQ KELEELFVDG ILIKPISPST LLNTILNVLG
KEVMRLSRKE DKQALYRESI HALRGAKVLL VEDNIINQEI AKEILEREGM DIVVANHGKE
ALEWIEKESF DGVLMDCQMP VMDGFEATRL MREGGHTLPI LAMTANAMEG DKERCLACGM
NDHISKPIDM AKLFITMAKW IVPSNPRPLK IIQKEERADR PLLNVEGLDI EKALLHVNNN
HALLETLWRR FVETQAECAE RIEEALRIGD TEKAMREAHT LKGLSGNIGA RELFESSKNL
EHSLKESSSD IPLFLCQTKQ DLETVIAHLK EAFLDEATHK EVLDFEAILT QEALHEKLND
LGYLLKELDS EAIDVLANIR ASLFHLGYKK EVEEMEKALA SFDFEKAYAL LKEIK
|
|---|
| |