Gene Sdel_0793 details

Gene Information

• Locus tag: Sdel_0793
• ID: 8592327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 788682
• End bp: 790838
• Gene Length: 2157 bp
• Protein Length: 718 aa
• Translation table: 11
• GC content: 40%
• Product: type I secretion system ATPase
• Protein accession: YP_003303859
• Protein GI: 268679428

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000558662
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCAG AAATCGCAAA AGAGTACGCA AAAGATCCTT TGTTATCGTG CTTAGTCCTT 
TTTACAAAGC TTTACAATGT TCCTTATAGT GCTGAAGCAC TCGTGGCGGG TTTGCCCATT 
GAAAAAGGGG TTAATTCTGT GGAGCTTTTT TCCATAAAAG GGGGCTCAAA ATCCCTTTTC 
TCTCGTGCGG CACAACGTGC GGGATTTGTT TCGAAATTGG TTCAAAAAGA GTTGGATGAA 
CTCTCTTCTT TGGTGTTGCC TTGTATTTTA GTGCTTAAAA ACCGCTCAGC ATGTATTTTG 
GAGCGTTTTG ATGAGACGCA TACAAAAGCG AAGATTATTC ACCCTGACAT TACAGAGGGT 
GAGGATTGGG TTGAGATAGC CACTCTTGAA AAAGAGTATA TGGGGTTTTG CTTTTTGCTC 
AAGAAAGAGT TTGCCTTTGA TAGCCCTCGG GAACGTCTTT TAAATAACAC AGGAACCAGC 
TGGTTTTGGG GTACGCTCAA TCGCTCAAAG CAAATTTACA TGGATGTGAT TATTGCATCT 
TTTTTAATCA ACCTCTTTAT TTTGGCAAGT CCCTTATTTA CGATGAACGT TTATGATAGA 
GTGATTCCTA ACAATGCCAT AGAAACACTC TGGGTTTTAG CCCTTGGGGT GTTTATTGTC 
TATCTTTTGG ATATTGTTTT AAAGTTTACA CGCTCGTACT TTTTAGAAAT CGCAGGAAAA 
AAGAGCGATG TGATTATGTC TTCTATTTTG TTTGAAAAAG TGATGGATTT GAAGATGGCG 
GCACGTCCAA AATCGGTCGG TGCCTTTGCC AATAACCTGA AAGATTTTGA TGCGATTCGC 
AACTTTTTTA CCTCTTCGAC CTTAGCGGCA CTCATTGACC TTCCTTTTGC ATTGATTTTT 
TTAGGGATGG TCTATTTTAT TGCGGGATAT ATGGTTTTAG TGCCGATTGT TTTGATGATT 
TTTATTTTGC TTTATACGCT GAGTGTGAAA AATGCTTTAA CGCAAAGTAT TGAGAGCACT 
TACCATGCCT CAGCAGTCAA AAATGGCATT TTGATTGAGA GTTTAACGCT CTTAGAGACC 
ATTAAAGCCT TTAGTGCAGG AGGTCATGCT CAATGGAAAT GGGAAGAAGC CACAGGAGAG 
ATTGCCAATC GTGGTTTAAA AGCTAAGATT TTATCGAGCT CTATTACAAC GGTTACCTCA 
TTTTTGATTC AGTTAGATTC TGTGGTGGTG GTGCTTTTGG GTGTGTATAT GATTAAAGAG 
GTAGAGTTAA CGATGGGTGG GCTTATTGCG GCGATTATCC TCTCTTCACG CGCGATTGCG 
CCGATGGCAC AAGTGGCTGC ACTGATTGCC AACTACGAAC AAGCCAAAAC GGCGTATAAG 
GCTTTAGATG ACATTATGAA ATTGCCTGTG GAGCGACCTG AAGGGAAGCG CTTTGTCCGT 
CGTGAAAAAC TTTTGGGTAC GATAGAGTTT AAAAATGTCA CATTTGCGTA TCCTGAAGCG 
CAAAAAAATT CCTTAGAAGG GGTCTCTTTT AAAATTAACG TAGGGGAAAA AGTAGCGATT 
TTAGGACGCA ATGGCTCAGG AAAAACCACG ATAGAAAAGC TTATTTTAGG GCTTTACGCA 
CCTGCTGAAG GGTCTGTGTT GATTGATGGG ATTGATATCA ATCAGATTGA TCCTGTGGAT 
TTGCGTAAAA ATATAGGTTA TGTTCCTCAA GATGTCATTT TGTTTCAAGG AACTGTTAAA 
GAAAATATCA TTTATAAAGC TCCTTATGTC GATGATGAGG CTATTTTAAG GGCGGCACAA 
GTAGGGGGTG TTAATGAGTT TGTTAATAGC CATCCTCTAG GCTTTGATAT GCCTATCTTA 
GAGCGGGGCG AAGGGCTTTC TTTAGGGCAA AGACAAAGTA TTGCCATTGC AAGAGCTTTT 
TTGCTCGATG CGCCTATTCT TTTACTCGAT GAGCCAACCA ATTCACTGGA CAATACGGCT 
GAAAATCACA CGAAGAAACT TCTTAAAGAG CATATTGAAG GTAAAACAAC GCTTTTAATT 
ACGCATAAAA TATCTCTTTT AGAGATTGTG GATCGTTTGA TTGTGGTTGA TAATGGACGT 
ATTGTGATGG ATGGTAAAAA AGAAGATGTA CTCGCAAAAT TAAATGGAAC GAGATAA 

 

Protein sequence

MEPEIAKEYA KDPLLSCLVL FTKLYNVPYS AEALVAGLPI EKGVNSVELF SIKGGSKSLF 
SRAAQRAGFV SKLVQKELDE LSSLVLPCIL VLKNRSACIL ERFDETHTKA KIIHPDITEG 
EDWVEIATLE KEYMGFCFLL KKEFAFDSPR ERLLNNTGTS WFWGTLNRSK QIYMDVIIAS 
FLINLFILAS PLFTMNVYDR VIPNNAIETL WVLALGVFIV YLLDIVLKFT RSYFLEIAGK 
KSDVIMSSIL FEKVMDLKMA ARPKSVGAFA NNLKDFDAIR NFFTSSTLAA LIDLPFALIF 
LGMVYFIAGY MVLVPIVLMI FILLYTLSVK NALTQSIEST YHASAVKNGI LIESLTLLET 
IKAFSAGGHA QWKWEEATGE IANRGLKAKI LSSSITTVTS FLIQLDSVVV VLLGVYMIKE 
VELTMGGLIA AIILSSRAIA PMAQVAALIA NYEQAKTAYK ALDDIMKLPV ERPEGKRFVR 
REKLLGTIEF KNVTFAYPEA QKNSLEGVSF KINVGEKVAI LGRNGSGKTT IEKLILGLYA 
PAEGSVLIDG IDINQIDPVD LRKNIGYVPQ DVILFQGTVK ENIIYKAPYV DDEAILRAAQ 
VGGVNEFVNS HPLGFDMPIL ERGEGLSLGQ RQSIAIARAF LLDAPILLLD EPTNSLDNTA 
ENHTKKLLKE HIEGKTTLLI THKISLLEIV DRLIVVDNGR IVMDGKKEDV LAKLNGTR