Gene Sdel_0571 details

Gene Information

• Locus tag: Sdel_0571
• ID: 8592101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 556117
• End bp: 556908
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 41%
• Product: shikimate 5-dehydrogenase
• Protein accession: YP_003303642
• Protein GI: 268679211

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACTCT TTACCCTTTT TGGCTACCCT GTAACCCACT CTATTTCTCC TAGACTTCAT 
AATGCAGTGA TGCAAGGGCT AGGCATTGAT GGGTGCTATA TTCGAACACC TATTGAACAT 
CCCCAAACCC TTCTTCCAAC CTTTAGGAAA CTTGATCTTT CAGGTGCCAA TGTAACGGTA 
CCTCACAAAG AAGTAGCTTT CGCGCACTGT GATGAAGTCA GAGGCATTGC CAAAGAGATT 
GGCGCAGTCA ATACATTAAT CAAAGAAGGC ACTCGCATCA TCGGTTACAA CACCGATGCA 
GAAGGATTTT ATGCGGCAAT AAAATCCTTT GGGCACCTTC GTAATGCACT GATTTTAGGG 
GCAGGAGGAA CGGCTAAGGC GATTGCGATG ATTTTAAAAG CACACCATGT TGATGTTACG 
ATTCTTAACC GCTCTGCTAG CAGACTCGAT TTTTTTGAGA AACTAGGCTT TACATGTAAA 
ACATGGGAGA CCTTTACACC CTCTTCGTAT GAGCTGATTA TCAATACAAC CTCCGCAGGA 
CTCAAAGATG AATCCTATCC TTGTGAAGAG GCTCTTTTGA ATCTACTCTT TGAGAAGGCA 
CACTACGCTT TTGATGTCAT TTATAACCAA CAAACTCCTT TTTTACGCCT TGCACAAGCG 
CATCATCTGA CATATAAAGA TGGTAAAGAG ATGCTTTTAT ATCAAGGTGT TTTGGCTTTT 
CATCTTTTTT TTGCACAACA ATACGATCTT AAAACAATCG AATCTTTGAT GCGCCCTGTT 
TTTGAACTCT AA 

 

Protein sequence

MQLFTLFGYP VTHSISPRLH NAVMQGLGID GCYIRTPIEH PQTLLPTFRK LDLSGANVTV 
PHKEVAFAHC DEVRGIAKEI GAVNTLIKEG TRIIGYNTDA EGFYAAIKSF GHLRNALILG 
AGGTAKAIAM ILKAHHVDVT ILNRSASRLD FFEKLGFTCK TWETFTPSSY ELIINTTSAG 
LKDESYPCEE ALLNLLFEKA HYAFDVIYNQ QTPFLRLAQA HHLTYKDGKE MLLYQGVLAF 
HLFFAQQYDL KTIESLMRPV FEL