| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0554 |
|---|
| Symbol | |
|---|
| ID | 8592084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | + |
|---|
| Start bp | 535108 |
|---|
| End bp | 537924 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | excinuclease ABC, A subunit |
|---|
| Protein accession | YP_003303625 |
|---|
| Protein GI | 268679194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA TTTACGGTGC TAAAGAAAAT AATCTTAAAA ATATTAACCT TGAAATTCCT
AAAAATAAGC TCGTGGTTTT TACAGGACTT AGCGGAAGTG GTAAAAGTAC TTTAGCGTTT
GATACCCTTT ATGCAGAAGG ACAACGCCGT TATATTGAGT CGCTCTCCTC ATACGCAAGG
CAGTTTTTGG ACAGGGTGGG TAAGCCTGAT GTGGAAAAAA TTGAAGGACT GACCCCTGCC
ATTGCGATAG ATCAGAAAAC GACCAGCAAA AATCCTCGCT CAACGGTAGG AACCATTACA
GAGATTTATG ACTACTTGCG TCTATTGTTT GCCAGAGTTG GAAAACAGCA CTGTCATTTG
TGTGGTAAAG AGATTTCGCA GATGTCTGTG GCGGATATTA TTGAACAGGT TTTAAAGTTA
CCTCCTGAAA CCAAGCTCTC TATCTTAGCG CCACTTGTGC GTGAGAAAAA GGGAAGTTTT
GCGGATATGA TTGAATCTTT GCGCCACAAA GGGTATGTCA GAGCGCAAAT TGATGGGGTG
ATGGTACGTT TGGATGAGGA GATAGAGCTT TCGAAAACGA AAAAGCATAC GATTAAAGTC
ATCATTGACC GTGTGGTGGT GCGAGAAGAA AATTTTGAGC GCATCGCCAG TGACATCGAA
AAAGCGCTTT TGGAGAGTTA CGGTGAGGTG GAACTAGATA TTGCCAACGC TGAGGAAGTA
GGACTTCCTA CCTCACACAT TCATTACAGT GAACATTTGG CGTGTTTTGA TTGTAAGATT
AGTTTTGAGC CTTTAGAGCC TCTTTCGTTT TCATTTAACT CCCCTAAAGG GGCGTGTGGG
GTGTGTGATG GTTTAGGGAT TCGCTATACG CTTGATTTAA AGAAAATTAT CAATGAAAAT
GTGAGCATTC AAGAGGGTGC CATCAAGATT TTTTATGGCT TTAATAAAAG CTTTTACGCC
AAATTTTTAG AAGCCTACTG TGAGGCTGCT GGTATTAATA CACGTATTCC GTATGAAGAG
CTTGAAGAGC ATCAACAAAG AGCTATCTTG CATGGCGGGG TGGAAGAAGC GACTTTCTTT
TGGAAAAAAC ATAAACTCGT ACGCAAATGG GAAGGGGTTA TTAAAATCGC TTATGACATG
CTGAAAGATG AAAAAGAGTT GGGCGAGTAT ATGAGTGAAA AAATCTGTGA TACCTGTGGT
GGATACCGTT TAAAAGCGGA GAGTTTAGCC GTAAAAGTGG CGGGAAAAAA CATCGCCGAC
ATCTTAGAAA TGCCCATAGA TAAATGTTTA GAATTTTTCA AAAACGATGA GAACTTTGCC
TACATGAAAG CGCAACATAA GATGATTTCT GAGCCGATTT TAAAAGAGAT ACGTGAGCGT
CTTTTCTTTT TATTTGATGT TGGACTTGGC TACATTAGCT TGGGAAGGGA TGCGAGAACC
ATTAGTGGTG GTGAGGCGCA ACGTATTCGC ATTGCTTCGC AAATTGGCAG TGGACTTACG
GGGGTTATGT ATGTTTTGGA TGAGCCTAGC ATTGGGTTGC ATGAGAGAGA TACGCTTAAG
CTGATTCGTA CCTTGCGTAA TTTGCAAAAA AAAGGCAATT CGGTCATTGT GGTGGAGCAT
GACAAAGAGA CCATCCAAAC GGCTGATTTT ATTGTGGATA TTGGACCTGG GGCTGGAAAG
TTTGGCGGGG AGATTGTTTT TGCGGGAACC AAAGAGGAGC TTTTAAAAAG CACTACCCTA
ACGGCACAGT ATCTTAATGG TACAAAAATT ATTAATTACC GAGAAAATAG AGCGCAAGAG
CGTTGGATTG AACTTAATCA TGTCACGATT AATAACATTC AAAATCTCGA TGTCAAAATT
CCCTTAGGCA ATTTAGTCGC CATTACAGGT GTGAGTGGCA GTGGTAAGAG TTCACTCATT
CTTCAAACTT TGCTTCCTGT GGCAAAAGAG TATCTTAACC GTGCCAAAAA GGTAAACAAA
GTAGCAGGGG TGGAGTGCAT AGGACTTGAG CAACTCGATA AAGTTATTTA TCTTGACCAA
AGTCCGATTG GCAGAACCCC TCGTTCTAAT CCTGCGACCT ATACAGGCGT GATGGATGAA
ATCCGTGCCT TGTTTGCCAA AACAAAAGAG GCGCAAATAC GAGGGTATAG CGTGGGGCGT
TTCTCGTTTA ACGTGAAAGG CGGACGCTGT GAGAAGTGTC AAGGAGATGG TGAGATAAAA
ATAGAAATGC ACTTTTTACC TGATATTATG GTGAAGTGTG ACGTCTGTAA AGGACACCGT
TACAATGCCC AAACCTTAGA GATTAAATAC AAAGGCAAAT CCATTTCAGA TGTTTTAAAT
ATGAGCGTGG ATGAAGCGTT TGAATTTTTT AAAGCGATTC CAAAAATCCA CCAAAAAGTA
CAAACCTTGG TGGATGTTGG ACTGGGCTAC ATCACTTTGG GGCAGAATGC CGTGACACTC
AGTGGCGGTG AGGCACAGCG TATTAAACTG GCGAAAGAGC TGAGTAAAAA AGATACCGGC
AATACCCTTT ATGTTTTAGA TGAACCCACC ACAGGGCTTC ATTTTGCCGA TGTGGATAGG
TTAGTAAAAG TCTTGCATCA TCTCACCGAT ATGGGCAATT CAGTCTTGGT TATTGAGCAC
AATATGGATG TCATCAAAAA TGCGGACTAT CTCATTGATA TGGGACCTGA GGGAGGCAGC
TATGGTGGGC GTATTATAGC GATGGGAACG CCTTTAGAGG TGGCAAAAGA GGCTTCTCAA
TCAGGCAGTT ACACGGGAAA ATTTTTAGCT TTAGAATTGG AAAGTGAAAA AAAGTAG
|
|---|
| Protein sequence | MIKIYGAKEN NLKNINLEIP KNKLVVFTGL SGSGKSTLAF DTLYAEGQRR YIESLSSYAR
QFLDRVGKPD VEKIEGLTPA IAIDQKTTSK NPRSTVGTIT EIYDYLRLLF ARVGKQHCHL
CGKEISQMSV ADIIEQVLKL PPETKLSILA PLVREKKGSF ADMIESLRHK GYVRAQIDGV
MVRLDEEIEL SKTKKHTIKV IIDRVVVREE NFERIASDIE KALLESYGEV ELDIANAEEV
GLPTSHIHYS EHLACFDCKI SFEPLEPLSF SFNSPKGACG VCDGLGIRYT LDLKKIINEN
VSIQEGAIKI FYGFNKSFYA KFLEAYCEAA GINTRIPYEE LEEHQQRAIL HGGVEEATFF
WKKHKLVRKW EGVIKIAYDM LKDEKELGEY MSEKICDTCG GYRLKAESLA VKVAGKNIAD
ILEMPIDKCL EFFKNDENFA YMKAQHKMIS EPILKEIRER LFFLFDVGLG YISLGRDART
ISGGEAQRIR IASQIGSGLT GVMYVLDEPS IGLHERDTLK LIRTLRNLQK KGNSVIVVEH
DKETIQTADF IVDIGPGAGK FGGEIVFAGT KEELLKSTTL TAQYLNGTKI INYRENRAQE
RWIELNHVTI NNIQNLDVKI PLGNLVAITG VSGSGKSSLI LQTLLPVAKE YLNRAKKVNK
VAGVECIGLE QLDKVIYLDQ SPIGRTPRSN PATYTGVMDE IRALFAKTKE AQIRGYSVGR
FSFNVKGGRC EKCQGDGEIK IEMHFLPDIM VKCDVCKGHR YNAQTLEIKY KGKSISDVLN
MSVDEAFEFF KAIPKIHQKV QTLVDVGLGY ITLGQNAVTL SGGEAQRIKL AKELSKKDTG
NTLYVLDEPT TGLHFADVDR LVKVLHHLTD MGNSVLVIEH NMDVIKNADY LIDMGPEGGS
YGGRIIAMGT PLEVAKEASQ SGSYTGKFLA LELESEKK
|
|---|
| |