Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0480 |
Symbol | |
ID | 8592004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 463618 |
End bp | 466755 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | cytochrome c assembly protein |
Protein accession | YP_003303552 |
Protein GI | 268679121 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.379709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGG TACTAAAGCG CATTCTTTCC ATTAAATCAG CCATCATTTT ACTGATGTTA TTTGGTTTTT TTAGTGGTTT TGCAACGTTT GTCGAAAATG ATTTTGGTGT AGAAACCAGT TGGGCACTCA TTTATACCGC ATGGTGGTTT GAGCTAATTC AAGTTGCACT GGGTATTATC TTGGTGTACA ACATCGTGAA ATATAAAATT TATACCCTCG ATAAACTCCC TTCGTTTCTT TTTCATTTGA GTTTTATTTT TATTCTTATT GGTTCAGGTG TAACACGTTA CTTTGGCTTT GAAGGATCGT TACATGTAAG AAATGGAATG CAAGAAAATA AAGTGATGTC AAGTGATTCT TTTATTAGTG CTACGGCGTT AAAAGAGAAT AAAACCTATC GTTATAGTCA TCCCAAATTG ATTTCACAAA TCGGAAGTAA CAATTTTTCG TTCTCATTTG ATGTGGATGG TGATAAGGCT GATGTTACGT TTAAAGAGTA TTTGACTTAC GCAACGAAAA AAGTGGTCGA GGATCCTATG GGAGAGCCTA TGATCTCAAT GATGCTCAGT GGTTATGGCG AGAGTCTTAG TGTCAATCTC AAAGAGGGTG AGCGTTATGA AACATCAGAA TATATTTTTA GTTTTAATGC CGCACCCAAA GAGAGTAAAA AAGAGGAGAT TCGTTTTACG CTCGAAAATG GAAAATTTTA TTTTACAGCG CCTTCTTCTG TTGCATGGTT TAAAATGGCA GAGAATGAAA AAGGTGAATA TGCCGCTAGT ATAAAGCACG ATTTTACAAC AGGGCAACTC TATACGGTTG GAAATATTAA TTTTGCGCCA AGATACATTG GTTTAAAAGG TAAAGAAAAA GTAGTTGCCG ATAAAACGCC GATGAATAAA AATGCTATTG TATCTGCTAT AGTTGTTGAT GTCGCTTTTA AGGGAGAGCA TAAAGAAGTG GCTCTTTTTG GTCAGGGGAA AGGAACTCAG GGTGAGCCTG TAAGGGAAGT TATCGCAGGA GTACCCTTTA TGTTTGAGTG GGGTTCTCAG ATTTTTACCT TACCTTTTCA TATTAAACTC AATGAATTTC AATTAGAGCG CTATCCTGGT TCTATGTCGC CTATGTCTTA TGCGAGTGAA GTAGAAGTGG TCGATGTTGA AAAAGGGGTA CAGATGCCGT TTCGTATTTA TATGAATCAT GTTCTTGATT ATCGAGGATT TCGATTTTTT CAAAGCTCTT ACGATAAAGA TGAAAAGGGA ACTATCTTAT CCGTTAACAA TGACCCTGGA AAATTGCCAA CTTATTTTGG GTATACCTTG TTGTGTTTAG GATTTTTCTT TAATTTTCTC AATGTAAAAA GTCGTTTTAG AAAACTTGCA TCTATGGTGC AGCGTGATAT GGTTAAAGCC AAATCAGTGA TAATGTTTGT GGCGCTTGGA TTACTTTTGT CGCAAGGAAA TTCTCTTCAT GCGGTAAGTT TGGAAGAGAA TATACACTTT TTAAAACGCT ACGATGCCAA ACATGCAGAT CAGTTTGGAC ATTTATTGGT TCAAGGAGCT GATGGTAGAT TTAAGCCTAT TGATACCATT GCGATGGAGA TGATGCATAA AGTCTATGCA CGTTCAACCT ATGAGGGGCT TAGTGCCAAT CAAGTCGCCC TGAGTATGAT GAGTTCACCC GCACAGTGGC AAGATATACC TTTTATCAAA GTGTTTCATC CTGAATTAAA AAAGATTTTG GGTATGGACG AGAAGCAAAA ATACGCTTCT TTTAATGATT TCTTTGAAAA AGAGGGAGAT CGTGGGTATA AACTGATTAA ATATTCTGAA GAAGCCAATC GTAAAAAACC AGTTCTTCGC AATCAGTTTG ATAAAGATGT CCTCAAGGTT GATGAGCGTG TTAATATCTG TTATATGGTT TATACAGGTG AAATCTTTAG AATGATTCCC AAACAAAATG ATGTGGCAAA ACGCTGGTTT CCTCCACAAG ATGCGGTGAT GCGATTTTCA AAGCAAGAGG GTGATGAAGT TAGAGCGCTT GTTGGTGGCT ATTTTGAAGC AATTAGCCTT GGATTGGAGA AGGGAAATTG GACAGAGGCA AATAAAGCGG TTGAAAAACT AGCTGCGTAT CAAGAACAGT ATAGCGGAGG TATTACTCCA AGTCTAAAGC GTGTTAATAC GGAAGTTTTC TTCAATCACG CACAAATTTT TGAGCGTTTA ACCCCTGTTT ATTTACTCAG TGGTCTTGTA TTGCTTTGTT TTATTTTTGC AAAAATGCTC AAGTCATCTT TACGTATTCA AATGCTCTCT CGTATTGTTT TGGTGATTAA TGCGGTTGCG TTTATAATAC ATACAGGAGG ACTAGGGCTT CGTTGGTATA TTGCGATGCA TGCTCCATGG AGTAATGGTT ATGAATCCAT GATTTACATT GCATGGGCGA TTGCGTTGGC GGGTATTTTC TTCTCACGTC AGTCTGTTGT CTCTTTAGCT TTAACCTCTA TTTTAGCGGG TATCACACTT TTTGTTGCGC ATTTGAGTTG GATGGATCCT CAAATCACCA CATTGGTTCC TGTTCTTAAC TCGTATTGGT TAAATATTCA TGTTTCAGTT ATTACGGCAA GTTATGGGTT TTTAGGGTTA TGTGCGCTTC TAGGATTTTT CACATTGATT CTTTTTATGT TACGAAGCAA AACCAATTCA AAACACAATC AAGAGTTTGA TCGAAATATT GTAGAAGCAA CACGTATTAA TGAAATGGCA ATGATTCTAG GATTGAGCCT TCTAACCGTA GGTAACTTTT TAGGTGGTGT GTGGGCCAAT GAGTCATGGG GACGTTATTG GGGATGGGAT CCAAAAGAGA CATGGGCGTT GGTTTCTATT CTTATTTATG CAGGAGTGGT GCATTTTCGA TTTGTTCCTA AGTGGAACAC CCCTTTTGCT TTTGCTGTAG CCTCTACGGT TTCGTTCTCT GCAATTATTA TGACCTATTT TGGGGTGAAT TTTTATCTCT CTGGAATGCA CTCATATGCC GCAGGTGATC CTGTTCCTAT TCCTGCATTT GTCTATTATA CTATTGTGAT TGTTGCTGCT GTTATTGCTT TGGCATATCC AAAACGAGAT ATAGGCAAGG CATTGTAA
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Protein sequence | MDLVLKRILS IKSAIILLML FGFFSGFATF VENDFGVETS WALIYTAWWF ELIQVALGII LVYNIVKYKI YTLDKLPSFL FHLSFIFILI GSGVTRYFGF EGSLHVRNGM QENKVMSSDS FISATALKEN KTYRYSHPKL ISQIGSNNFS FSFDVDGDKA DVTFKEYLTY ATKKVVEDPM GEPMISMMLS GYGESLSVNL KEGERYETSE YIFSFNAAPK ESKKEEIRFT LENGKFYFTA PSSVAWFKMA ENEKGEYAAS IKHDFTTGQL YTVGNINFAP RYIGLKGKEK VVADKTPMNK NAIVSAIVVD VAFKGEHKEV ALFGQGKGTQ GEPVREVIAG VPFMFEWGSQ IFTLPFHIKL NEFQLERYPG SMSPMSYASE VEVVDVEKGV QMPFRIYMNH VLDYRGFRFF QSSYDKDEKG TILSVNNDPG KLPTYFGYTL LCLGFFFNFL NVKSRFRKLA SMVQRDMVKA KSVIMFVALG LLLSQGNSLH AVSLEENIHF LKRYDAKHAD QFGHLLVQGA DGRFKPIDTI AMEMMHKVYA RSTYEGLSAN QVALSMMSSP AQWQDIPFIK VFHPELKKIL GMDEKQKYAS FNDFFEKEGD RGYKLIKYSE EANRKKPVLR NQFDKDVLKV DERVNICYMV YTGEIFRMIP KQNDVAKRWF PPQDAVMRFS KQEGDEVRAL VGGYFEAISL GLEKGNWTEA NKAVEKLAAY QEQYSGGITP SLKRVNTEVF FNHAQIFERL TPVYLLSGLV LLCFIFAKML KSSLRIQMLS RIVLVINAVA FIIHTGGLGL RWYIAMHAPW SNGYESMIYI AWAIALAGIF FSRQSVVSLA LTSILAGITL FVAHLSWMDP QITTLVPVLN SYWLNIHVSV ITASYGFLGL CALLGFFTLI LFMLRSKTNS KHNQEFDRNI VEATRINEMA MILGLSLLTV GNFLGGVWAN ESWGRYWGWD PKETWALVSI LIYAGVVHFR FVPKWNTPFA FAVASTVSFS AIIMTYFGVN FYLSGMHSYA AGDPVPIPAF VYYTIVIVAA VIALAYPKRD IGKAL
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