| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0445 |
|---|
| Symbol | |
|---|
| ID | 8591968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | - |
|---|
| Start bp | 428846 |
|---|
| End bp | 430129 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | TRAP dicarboxylate transporter, DctM subunit |
|---|
| Protein accession | YP_003303517 |
|---|
| Protein GI | 268679086 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000085422 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATGC TTAGTATATT TGGATTGCTC TTTCTTCTCA TGTTCCTAGG TGTTCCCGTA
TCTGTCTCTT TGGGTGCGAG TACACTGATT ACGGCTTTCT TTTTTACCGA CATGGACTTA
ATGGGCATTA CCTCACATGT GTTTGATGGT CTCAATAAAT ATACGTTGAT GGCGATTCCT
ATGTTTATTT TAGCGGGTTC TTTTCTCTCT AAAGGTGGTG CGGCGAAGCG TATTATTGAT
TTTGCGCAAT CCATCGTAGG ACACCTTCCT GGTGGTCTGC CTATTTCGGC GATTTTTGCA
TCAATGATTT TTGCAGCCGT GAGTGGAAGC TCACCCGCAA CCGTTGCGGC GATTGGTTCT
GTAATGTTTT CAGCGATTAA AGAAGCGGGG TATCCTAGAG GTTATGCGAT TGGTACGATT
GCAACATCAG GAAGTTTGGG TATTTTGATT CCACCATCTA TCGTTTTTAT CGTGTATGGT
GTCACCGCAG ACCTTTCCAT TGGTAAACTC TTTATGGCAG GTGTTATTCC GGGTCTTCTT
ATAGGCTTTA TGCTTATGGC ACTGACCTAT GTAGGTGCGG TACGCTTAGG CTTCAAAAGA
CAAGAACCTG CTCCATTTAA AGTTCGTTTG AAAAAGTTTA AAGAGGCATT TTGGGCATTG
ATGCTCATTG TTGTGGTTAT CGGCGGAATT TACGGTGGTC TCTTTACCCC AACCGAAGCG
GGTGCGGTGA GTGCGGTGTA TGCTTTTGTC GTCTCTGTCT TTGTTTATAA AGATTTGAAA
CTTAAAGATG TCTATCCTAT TATCATCGAA GCGGCACTAA CAAGCTCAAT GATTTTCTTT
GTTATCGCCA ATGCGATGAT TTTTGCGCAC TTTTTAACCG ATGAGACGAT TCCTCAGCAA
ATCACGCAAA TGATTATGAA TGCCAATGTT GGACCGATTA TGTTCTTGGT TATTGTCAAT
ATCTTGCTCC TTTTGATGGG ACAATTTATG GAGCCTAGTT CCATTGTTAT GATTACCGTA
CCACTTCTAT TGCCATTGGT TTTAGCACTC GGTATTGACC CAATTCACTT TGGTGTTATC
ATGGTCGTCA ACATGGAAAT TGGTATGATT ACCCCGCCTG TTGGACTGAA TCTCTTTGTG
GCAGCAGGTA TGACGGGGCT GAGTCTCAAA GAGGTCGTTG TGGCATCCCT TCCGTGGGTT
GCTGTTTTAT TTGTAGGACT TATTATTATT ACGTATATAC CTATCATCTC TTTGTGGTTA
CCACAGTTAA TGTTTGGTAT CTAA
|
|---|
| Protein sequence | MLMLSIFGLL FLLMFLGVPV SVSLGASTLI TAFFFTDMDL MGITSHVFDG LNKYTLMAIP
MFILAGSFLS KGGAAKRIID FAQSIVGHLP GGLPISAIFA SMIFAAVSGS SPATVAAIGS
VMFSAIKEAG YPRGYAIGTI ATSGSLGILI PPSIVFIVYG VTADLSIGKL FMAGVIPGLL
IGFMLMALTY VGAVRLGFKR QEPAPFKVRL KKFKEAFWAL MLIVVVIGGI YGGLFTPTEA
GAVSAVYAFV VSVFVYKDLK LKDVYPIIIE AALTSSMIFF VIANAMIFAH FLTDETIPQQ
ITQMIMNANV GPIMFLVIVN ILLLLMGQFM EPSSIVMITV PLLLPLVLAL GIDPIHFGVI
MVVNMEIGMI TPPVGLNLFV AAGMTGLSLK EVVVASLPWV AVLFVGLIII TYIPIISLWL
PQLMFGI
|
|---|
| |