Gene Sdel_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0320 
Symbol 
ID8591837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp304998 
End bp306155 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content40% 
IMG OID 
Productsigma-54 factor interaction domain-containing protein 
Protein accessionYP_003303392 
Protein GI268678961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATTG CCATTGTAGA AGACGATATA AATATGCGAA AATCCCTAGA AATTGCCCTA 
GGAGAGTATG AAGAATTTAA AATATCGAGC TACAAAAGTG CTTTGGATGC ACTCAAAAAG
ATTGACACTA GTGTTGATTT AATCGTCACA GACATTAATA TGCCAGGTAT GGATGGTATC
GAATTTATCA AAAAACTTGA TGGGCTTTAC GATATTATCG TTATCACAGG TAATGCAACG
CTTAGCCGTG CCATTGAGTC GGTACGTTTG GGTGTCAAAG ACTTTTTAAC CAAACCCTTT
GAGATTGAAA CCCTTGTTGA AGCGATTAAA CGACACGATA AAATTCGAAG CAAAGTGAAA
GAGACCCCTG AAAAGATAGA AACACTCAAA GAGACCAGCA ACGATTTTAT CGCTACCTCA
CCTGCTTTAG ATAAAGCACT CCTTATGGCA CGAAAAGCCG CTAAAACAGA TGTGAGCGTA
TTACTCTTAG GTGAAAGTGG TGTGGGGAAA GAGTTATTTG CGAATTATGT TCACAAAAAC
TCTCCACGTG CTAAGAACCC TTTTGTCGCC ATTAATATGG CAGCCATTCC TGAAAATTTA
CTAGAAAGTG AACTTTTTGG TTATGAAAAA GGGGCATTTA CAGATGCCAC GACTGAGAAA
AAAGGGTATT TTGAAGTTGC TCATGGGGGC ACACTTTTTT TAGATGAAAT TGGTGAAATG
CCCATGATGC TTCAAGCCAA ACTTCTACGT GTCATTCAAG AACGTGTGAT GGTGCGTGTG
GGTGGAACCA AAGAGATTCC GATTGATGTG CGCATTGTCT CCGCAACCAA TGCAGATATT
CAGAAAAATA TCAAAGAAGG GCGTTTCCGT GAGGATTTGT ATTATCGACT CAATACCATT
CCTATCGAAA TTCCTCCATT AAGACAACGT AAAGAGGAGA TTATGCCTAT TTGTGAGGTC
ATTTTAGGGA GGGTGATTCA AAAGTATGGT TTGCAAAAAC GCTATTTTTC AGAAGAAGCC
ATCGAATCAC TGATGCGTTA TCCTTGGCCA GGAAATATTC GAGAACTCAT CTCTGTCGTT
GAAAGAGCTG TTATTCTAAG TGATGCGGAA GCTATCAGCA AAGAGGATCT TTTTTTAGAG
AGTCGTCATA GTTATTGA
 
Protein sequence
MHIAIVEDDI NMRKSLEIAL GEYEEFKISS YKSALDALKK IDTSVDLIVT DINMPGMDGI 
EFIKKLDGLY DIIVITGNAT LSRAIESVRL GVKDFLTKPF EIETLVEAIK RHDKIRSKVK
ETPEKIETLK ETSNDFIATS PALDKALLMA RKAAKTDVSV LLLGESGVGK ELFANYVHKN
SPRAKNPFVA INMAAIPENL LESELFGYEK GAFTDATTEK KGYFEVAHGG TLFLDEIGEM
PMMLQAKLLR VIQERVMVRV GGTKEIPIDV RIVSATNADI QKNIKEGRFR EDLYYRLNTI
PIEIPPLRQR KEEIMPICEV ILGRVIQKYG LQKRYFSEEA IESLMRYPWP GNIRELISVV
ERAVILSDAE AISKEDLFLE SRHSY