Gene Sdel_0315 details

Gene Information

• Locus tag: Sdel_0315
• ID: 8591832
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 299137
• End bp: 301212
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 39%
• Product: TRAP transporter, 4TM/12TM fusion protein
• Protein accession: YP_003303387
• Protein GI: 268678956

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.171628
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAACAC TTGAAGAACG ACTGGATGAT GCGAAACTCA TCAGTGAATT TGAAGGGCAC 
AGAGATTTTG AAAGCACAAC ATGGCAATAT TGGTTTGTCG CTGCGATTGC TTTTTGCTGG 
TCTTTATATC AACTTTATAT CGTCATCGAT CCAGGAAACA GTGCTCATGT AAGAGCAATT 
CACTTGGCTT TTGGTATTGC GTTAGCTTTT TCAATGCATG CGATGAGCAA AAGTATTAAA 
CTTCAATCGG TTATTACATG GTACGATTTT GTCATTATGT TGGTAGGTAT TGCTGCTGTT 
TTATACCAAT GGTATGCCTA TAGAGATCTG GCAATGCGTT CGGGTGCGTG GACACAGACA 
GATATTATCG TGGGAATTGT CACTATTTTA GTCGTACTTG AAGCATCCAG AAGAGTTATG 
GGGCTTCCAT TGATGCTAGC GGCGGTTGTT TTTTTACTGT ATGATTATTT TGGTCCTTAT 
CTACCCGATA TGATTGCACA CAAAGGTGCA AGTATCAATA AAATGATGGG ACAAATGGTG 
TTAACCACCG AGGGTATTTT TGGTGTACCA TTGGGTGTGA GTGCAAGTTT TGTCTTTTTA 
TTTGTTTTGT TTGGTTCTTT ACTGGATAAA GCAGGGGCAG GTGAATATTT TATTAAAGTT 
TCTTATACGA TTTTGGGTAA ATACGATGGA GGTCCTGCTA AAGCAGCGGT TGCGGCTTCG 
GGTATGTTTG GTATGATTTC AGGCTCTTCT ATTGCCAATA CGGTAACGGT AGGAACATTT 
ACAATTCCTC TGATGAAGCG TCTTGGGTTT AGTTCACACA AAGCAGCAGC GGTTGAGACG 
GCAGCTTCGG TTAATGGTCA GTTGATGCCT CCTATTATGG GTGCTGCGGC ATTTATTATG 
GCAGAGTTTT TAGGATTAGA TTATACGGAT ATCGTTTTTG CGGCGTTTAT CCCTGCTTTT 
ACCTGTTATG CGGCACTTTT TTATATTGTG CATATTGAAG CCAAAAAACA TGGCTTAAAA 
GGAGAAGATT CTAGTACCTT GGGTCGTACA TGGCCTATTT TTATTCGAGG TATTCACTAT 
CTGATTCCTA TCTTTTTCTT GGTCTATACA CTTATTGTTT TACGACAATC AGCACAAAGT 
GCGGCGTTTA GTGCCATTAT GTTTTTGATG ATTATTATGG TCGTTCAAAA ACCATTTAAA 
GCTTACTTAA ATAAAGAAAA AATAACCCTT CCTCTTGTGA TGGAAGGTTT TGCTGATATT 
GGAAATGGTA TGGTTGCGGG TGGTAAAAAT ATGGTCTCTA TCGCCGTTGC AACGGCAGTT 
GCAGGTATCA TCGTAGGGTC TGTAACACTC ACAGGAATTG GTTTGGTTCT TGCTGAGGTG 
ATTGATAATC TCTCTGGAGG TTACATCTTA GGGGTTCTTT TCTTAACAGC ATTTGTTTCA 
TTGGTTCTGG GTATGGGGCT TCCAACAACT GCCAATTATA TTGTTATGGC AGCCTTAACC 
GCACCAATTA TCATGGAATT AGCAGGCAAT AGTGGTTATT TGATTCCTAC GATTGCGGCG 
CATATGTTTG TTTTTTATTT TGGTATTTTA GCCGATGACA CGCCACCTGT GGGAATGGCG 
GCTTATGCTT CTGCGGCGAT TGCAAAGAGT GATCCTATTA TTACGGGTAT TCAGTCGTTT 
ATTTACGATA TTCGAACAGC TATCTTGCCG TTTATGTTCT TCTTTAACAA TGAGCTTTTA 
CTCATTGGTG GCGTTGATCC AGAAGATCCT AATGATGCTT CAAAATGGCA GTGGATTACC 
AATCCTTTCG AAATTGCTCT TATTTTTGGT GGTGCAATTT TGGGTATGTT TGCTTTCACT 
TCGGCGACAC AGGGATTTAT TTTAAGAAAA GTAAACATGA TTGAACGAAT AAGCTTAATT 
GTGGTGATTC CATTTTTAAT GTTGCCTAAA TTGATGGCTG TCAAACTTGG ATTGCCTAGT 
CATTATATCT CTTATCTCAT TGGTCTTGGC ATCTATGGAT TTATCTATTT CAATCAGCGC 
ATTCAGTACA AAAAAGCGCA AGCTCTTCTT GTTTAA 

 

Protein sequence

MKTLEERLDD AKLISEFEGH RDFESTTWQY WFVAAIAFCW SLYQLYIVID PGNSAHVRAI 
HLAFGIALAF SMHAMSKSIK LQSVITWYDF VIMLVGIAAV LYQWYAYRDL AMRSGAWTQT 
DIIVGIVTIL VVLEASRRVM GLPLMLAAVV FLLYDYFGPY LPDMIAHKGA SINKMMGQMV 
LTTEGIFGVP LGVSASFVFL FVLFGSLLDK AGAGEYFIKV SYTILGKYDG GPAKAAVAAS 
GMFGMISGSS IANTVTVGTF TIPLMKRLGF SSHKAAAVET AASVNGQLMP PIMGAAAFIM 
AEFLGLDYTD IVFAAFIPAF TCYAALFYIV HIEAKKHGLK GEDSSTLGRT WPIFIRGIHY 
LIPIFFLVYT LIVLRQSAQS AAFSAIMFLM IIMVVQKPFK AYLNKEKITL PLVMEGFADI 
GNGMVAGGKN MVSIAVATAV AGIIVGSVTL TGIGLVLAEV IDNLSGGYIL GVLFLTAFVS 
LVLGMGLPTT ANYIVMAALT APIIMELAGN SGYLIPTIAA HMFVFYFGIL ADDTPPVGMA 
AYASAAIAKS DPIITGIQSF IYDIRTAILP FMFFFNNELL LIGGVDPEDP NDASKWQWIT 
NPFEIALIFG GAILGMFAFT SATQGFILRK VNMIERISLI VVIPFLMLPK LMAVKLGLPS 
HYISYLIGLG IYGFIYFNQR IQYKKAQALL V