Gene Sdel_0296 details

Gene Information

• Locus tag: Sdel_0296
• ID: 8591812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 281109
• End bp: 281822
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 39%
• Product: RNA polymerase sigma factor, FliA/WhiG family
• Protein accession: YP_003303368
• Protein GI: 268678937

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000331277
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCTA TGGTCAAAAA GCAGCCTAAC CCATACAGTC AAAATTTAAA AAAAGAGCAA 
GATGAACTTG TATTGCAATA CCTTCCTGCG GTTCGTGCTA TGGCGTATCG GTTACGTGAG 
CGTTTGCCAG CTTCTGTGGA TGTGAATGAT TTAATTTCGA TTGGTACAGA GGAGATGATT 
AAACTCTCCC GTCGCTATGA TAAAGACCAA AATGACTCTT TTTGGGGATA CGGTAAAAAA 
CGTGTGTATG GCTCTATGCT CGATTTCTTA CGCTCCCTTG ATACGATGAG CAGGGCTAAC 
AGGCGTCTCA TTAAATTGGT TGATCAAGAA ATTACTGCTT ATTTGGGTGA ACATGGGAGT 
GAGCCTGATG ATGCGTATTT GGCAAAAGTG TTGGGCGAAG ATAGTGAAAA AATAGCTGAA 
GCACGCAATA GTGCGATGAT TGTCTCTGTG ATGTCACTCA ATGAACAAGT GACGATTCTC 
TCAGGTGAAG ATACAGCACA AAAAGTAGAA AAAGATGAGT TGATGGAGAT GGTTCAAAGC 
ATTCTTTCAA CGTTTAATGA ACGTGAACAG ATGATTATTC AGCTCTACTA TTTTGAAGAG 
CTCAATCTTA AAGAGATCAG TGAAATTTTA GAGATTAGTG AGTCACGAAT TTCACAAATT 
CATAAAAAAC TGTTAGCAAA ACTCAAAGAA CAATTAGGGT TATACCATGG CTGA 

 

Protein sequence

MNPMVKKQPN PYSQNLKKEQ DELVLQYLPA VRAMAYRLRE RLPASVDVND LISIGTEEMI 
KLSRRYDKDQ NDSFWGYGKK RVYGSMLDFL RSLDTMSRAN RRLIKLVDQE ITAYLGEHGS 
EPDDAYLAKV LGEDSEKIAE ARNSAMIVSV MSLNEQVTIL SGEDTAQKVE KDELMEMVQS 
ILSTFNEREQ MIIQLYYFEE LNLKEISEIL EISESRISQI HKKLLAKLKE QLGLYHG