Gene Sdel_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0189 
Symbol 
ID8591705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp177088 
End bp180345 
Gene Length3258 bp 
Protein Length1085 aa 
Translation table11 
GC content41% 
IMG OID 
Productcarbamoyl-phosphate synthase, large subunit 
Protein accessionYP_003303262 
Protein GI268678831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAC GTCAAGATAT TAAAACCATA TTATTAATTG GATCAGGTCC AATCGTCATC 
GGACAGGCAT GTGAATTTGA CTACTCTGGA ACGCAAGCGG CAAAAACGCT TAAAGAGTTA
GGCTATCGTG TTGTTTTGGT GAATTCAAAT CCTGCAACGA TTATGACAGA CCCTGAGTTT
GCAGATAGAA CGTATATTGA ACCTATTACT CCAGAAGTGA TTGCACGCAT TATTGAAAAA
GAGAGTGTTG ATGCTGTGCT TCCAACGATG GGTGGGCAAA CAGCGCTGAA TGTTGCCATG
ACCATGCATG AAAAAGGGAT GCTTAACAAT GTCACATTTT TAGGGGCAAA TCCTGCGGCC
ATTAAGAAAG GTGAAGATAG ACAAGCTTTT AAAGAGGCGA TGTTGAAAAT CGGAATGGAT
TTACCTATTA GTGCCTATGC TTACAACATG GAAGATGCGT ATGTGGCGGC TGAAAAAATA
GGCTTTCCAT TGATTATCCG TGCTTCTTAT ACCCTAGCAG GTGGCGGTAG TGGTGTTGCG
TATAATATTG ATGAGTTTAA AGAATTGGCG ATGGCAGGAT TGGATGCCAG TCCGATTAAT
GAGATTTTGA TTGAAGAGTC ACTCTTAGGT TGGAAAGAGT ATGAGATGGA AGTCATTCGT
GATAGAGCGG ATAACTGCAT TATCGTCTGT TCCATTGAAA ACCTAGACCC AATGGGTGTG
CATACGGGAG ATAGTATTAC CATTGCACCA GCGCTTACGT TAACGGATAA AGAGTATCAG
CGTATGCGAA ATGCTTCGTT TGCCATTTTG CGTGAGATTG GCGTCGATAC GGGTGGAAGT
AACGTCCAGT TTTCAATTTG TCCTAACACA GGTCGTATGA CGGTGATTGA GATGAACCCT
CGTGTGAGTC GTAGTTCGGC ACTTGCTTCT AAAGCGACAG GGTATCCTAT CGCCAAAGTG
GCGACACTTT TGGCGGTTGG TTTTACGCTT GATGAGATTA AAAATGACAT TACAGGAACA
GCGGCAAGTT TTGAGCCTGT CATTGACTAC ATTGTGACAA AAGTGCCTCG CTTTACCTTT
GAAAAATTTC CACTTGCCGA TTCGACATTA ACGACTTCAA TGAAGAGTGT GGGTGAAGTG
ATGGCGATTG GTCGTACGTT TAAAGAGTCG TTCCAAAAAG CACTCTGCTC ACTGGAGACC
AATCTTAGTG GTTTTGAGAG TATGAAAGTG GATGAAGAAA AACTCAAAAA TGAGATTCGT
CGCCCCAATG CGGATAGAAT GCTCTATGTA GGTGAAGCGT TCCGTCGTGG GTACAGTGTG
GAAGATATTT TTGCGTTAAG TAAGATTGAT CCGTGGTTTT TAAATCAGTT TAAAGAGATT
ATTGATTTTG AAAAAAAGAT CGATATGTTT ATTTTAAATG ATGAAAAGCT TTTGCGTCAG
GCTAAAACGA TGGGCTTTTC GGATAAGATG ATTGCAAAAC TTATTAATCA AGAAGACAAT
TTAGAACTGA CCTCAAATGA TATCTATTTT GCACGAACTA AACTTGGCAT TGATTTTGAG
TACAATGAAG TCGATACCTG CGCGGCAGAG TTTAAAGCCT TAACACCGTA TCTTTACTCT
ACCACTAATG TGACAAAACT TCCTTTACAT GTAAAGAGTG AAGAGAGCCA AAAAAAGGTG
ATGATTATTG GTGGGGGGCC TAACCGAATT GGTCAAGGTA TCGAGTTTGA CTATTGTTGT
GTGCATGCGG CGTATGCGCT AAATGATATG GGTGTTAAAA CCATTATGTA TAACTGTAAT
CCTGAAACCG TTTCAACCGA TTACGATACC AGCGATATTC TTTACTTTGA GCCGATTGAT
TTTGAACATG TAAGAAGTGT GGTTGAAAAA GAGAATCCCG ATGGGATTAT CGTTCATTTT
GGTGGACAAA CACCGCTTAA ATTAGCGAAG AAATTGACCG TTATGGGTGC AAAAATCATC
GGTACCACCG CACGTGTGAT TGATATGGCA GAAGATAGAG AGAAGTTTTC TAAATTTATT
ACCGAAAATA ACATTAAGCA ACCAAATAAT GCCACTGCAA CCAGCGAAGA AGAGGCGATA
GAGAAAGCTA AAGAGATTGG GTATCCTGTT TTAGTGCGTC CAAGTTATGT TCTCGGTGGA
CGTGCGATGC GTATCGTCTA CAACGAGAGT GAGCTTCGAA CGTATATGAA TGAAGCGGTC
AGTGTAAGCC ATAATTCACC TGTTCTCATC GACCAGTTTT TAGACCGTGC CATTGAAGTG
GATGTGGATG CCATTTGTGA TGGTAAAGAT GTGTACATTG GTGGTATTAT GCAACACATT
GAAGAAGCGG GAATTCATAG TGGCGATAGC GCATGTTCTC TGCCTAGTGT CAGTTTAAGC
GATGCTATTT TGGCAAAAAT TGAAGCGCAA ACACAACAAA TCGCTCTTAA TTTAGGTGTT
GTAGGTTTGA TGAACATTCA ATACGCTATC TATCAAGACG ATGTATATAT GATTGAAGTG
AATCCAAGAG CGAGTCGTAC CGTGCCATTT GTGAGTAAAG CAACAGGTAT GCCAATGGCA
AAAATAGCCA CTCGTGTCAT GTTTCAAGGT AATCTTAGAG AAGCGCTTAA ATTTTACGAT
AAATTTGATG TGTTACGAGA AGAAAATGGC ATTTTAAAAC CTAAGAAATT TGATCATGTT
GCAGTGAAAG AGGCGGTATT CCCGTTCAAT AAACTTCAAG GCGCAGACCT CATTTTAGGA
CCTGAGATGA AATCAACAGG CGAAGTCATG GGTATTAGCA AAAACTTCCC AGCTTCGTTT
GCAAAAAGTC AAATCGCTTC GGCTAACGTG CTTCCAAAGA GTGGCTCTGT GTTTATCTCA
TTGGTCGATA TCGACAAAAG TTTTGCGAAA CAAATCGGTG AGAAATTTGT TCAATTAGGC
TTTAAAGTGG TTGCCACAGG CGGTACGCAC AAAGCGCTTC AAGATGCGGG TGTGGAGGCT
GAGTTTGTCT ATAAAATCAG CGAGGGTCGT CCAAATATTG AAGATAAACT CAAAAATGGG
GATATTGCGC TTGTCATTAA TACGAGTGAT GCCAAATCAA GCAAAGACGA TGCGAAGAAA
ATTCGCCAAG CCGTGCTTCG TTTTAAAATC CCTTATTTTA CCACCGTTGC TGCCGCTGCT
GCTGCGACAG AGTCCATTGA GTACATTCAA GATAAAAGCG CACTTGAACC ACGTGCATTA
CAAGACTATT TAAACTAA
 
Protein sequence
MPKRQDIKTI LLIGSGPIVI GQACEFDYSG TQAAKTLKEL GYRVVLVNSN PATIMTDPEF 
ADRTYIEPIT PEVIARIIEK ESVDAVLPTM GGQTALNVAM TMHEKGMLNN VTFLGANPAA
IKKGEDRQAF KEAMLKIGMD LPISAYAYNM EDAYVAAEKI GFPLIIRASY TLAGGGSGVA
YNIDEFKELA MAGLDASPIN EILIEESLLG WKEYEMEVIR DRADNCIIVC SIENLDPMGV
HTGDSITIAP ALTLTDKEYQ RMRNASFAIL REIGVDTGGS NVQFSICPNT GRMTVIEMNP
RVSRSSALAS KATGYPIAKV ATLLAVGFTL DEIKNDITGT AASFEPVIDY IVTKVPRFTF
EKFPLADSTL TTSMKSVGEV MAIGRTFKES FQKALCSLET NLSGFESMKV DEEKLKNEIR
RPNADRMLYV GEAFRRGYSV EDIFALSKID PWFLNQFKEI IDFEKKIDMF ILNDEKLLRQ
AKTMGFSDKM IAKLINQEDN LELTSNDIYF ARTKLGIDFE YNEVDTCAAE FKALTPYLYS
TTNVTKLPLH VKSEESQKKV MIIGGGPNRI GQGIEFDYCC VHAAYALNDM GVKTIMYNCN
PETVSTDYDT SDILYFEPID FEHVRSVVEK ENPDGIIVHF GGQTPLKLAK KLTVMGAKII
GTTARVIDMA EDREKFSKFI TENNIKQPNN ATATSEEEAI EKAKEIGYPV LVRPSYVLGG
RAMRIVYNES ELRTYMNEAV SVSHNSPVLI DQFLDRAIEV DVDAICDGKD VYIGGIMQHI
EEAGIHSGDS ACSLPSVSLS DAILAKIEAQ TQQIALNLGV VGLMNIQYAI YQDDVYMIEV
NPRASRTVPF VSKATGMPMA KIATRVMFQG NLREALKFYD KFDVLREENG ILKPKKFDHV
AVKEAVFPFN KLQGADLILG PEMKSTGEVM GISKNFPASF AKSQIASANV LPKSGSVFIS
LVDIDKSFAK QIGEKFVQLG FKVVATGGTH KALQDAGVEA EFVYKISEGR PNIEDKLKNG
DIALVINTSD AKSSKDDAKK IRQAVLRFKI PYFTTVAAAA AATESIEYIQ DKSALEPRAL
QDYLN