Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0056 |
Symbol | |
ID | 8591571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 56244 |
End bp | 57152 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_003303129 |
Protein GI | 268678698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCATATA TTTTGAAAAA CTTTTTTCTT GAAAAACCCA CTCCTGCTTT TCGATTTCTT ATGGATACAT TTGGTATCAG TATGAAAGAA GCGCAAAAAA TTATTGATAA GCGACGGGTC TTTGTTGAAG ATGAACAGCT CATGCGCAAA TCAACTTTGA TTTCTGGAAA GATTGGTGTG GTTGTGTTTG AGGGAGATTC TAAAGGGTTG CGTCCTATTT TTGAAACAGA AGATTTTGCG GTGTTTGATA AACCTAGTGG CGTGATGATC CATCCAAGAA AGCGAAGCGA TGGTTACACG CTTAATGATG AGATTAAATC GCTTTATGGT AAAGATGCCA ATGCGGCGCA TCGCATTGAT AAAAGTACAA GTGGGTTGGT TTTGGTGGGA AAACATAAGC AATCAGAAAT TGCGCTTAAA GAGATTTTTG CAACACGTAA AGTTCAAAAG AGTTATATCG CATTGGTGAA AGGGCATCTG AAAGAGGAAC TTTTGATTGA TGAAAAATTG AAGCGTGATG TGGAAACGAG TCAAATTCGT CTGAAAGTTC ATGTGGATGA GAGAGGCAAA CCGTCTCAAA CCAAAGTGAT TCCCCTGCAC TATTTTGAAG ATAAAGATGC GACACTGGTA CAAGCTTTTC CCTATACCGG AAGACAACAC CAAATTCGTG TTCATTTGTT CCACGTGAAA CATCCCATTG TGGGTGATAT GATTTATGGG GTAGAAGAAG AAGATGCTGA GCGTTATTTG GATGGAAGCA TGAGTGCAGA AGAACAGTAT GAAAAGACAT TGAGTTCACG GCTTCTTTTA CATGCTTATT CGCTCTCGTT TAATTTTAAA GGAGTTGATT ATACGATAGA GTCAACCATA GATGTTAAAA ATGAATTTTA TGCATTAATG AAAGATTGA
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Protein sequence | MAYILKNFFL EKPTPAFRFL MDTFGISMKE AQKIIDKRRV FVEDEQLMRK STLISGKIGV VVFEGDSKGL RPIFETEDFA VFDKPSGVMI HPRKRSDGYT LNDEIKSLYG KDANAAHRID KSTSGLVLVG KHKQSEIALK EIFATRKVQK SYIALVKGHL KEELLIDEKL KRDVETSQIR LKVHVDERGK PSQTKVIPLH YFEDKDATLV QAFPYTGRQH QIRVHLFHVK HPIVGDMIYG VEEEDAERYL DGSMSAEEQY EKTLSSRLLL HAYSLSFNFK GVDYTIESTI DVKNEFYALM KD
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