| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_0019 |
|---|
| Symbol | |
|---|
| ID | 8591530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | - |
|---|
| Start bp | 18411 |
|---|
| End bp | 19619 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | outer membrane porin |
|---|
| Protein accession | YP_003303092 |
|---|
| Protein GI | 268678661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00360128 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT CACGTTTAAG TTTAGTGGCT ATGGCGGCAC TTGCTACGCT TTCAAACAAC
GCTTTTGCAG CAGACAATCT TGAAGATGCG TTTAAAAACG GTAAAGTAGC AGGGGAGATT
CGTGCCTACT ATTTTAGCAA AGATATCCCC AATGACCACA AAGGGCATGA AGATATTTTT
GCCACAGGTT TAATGCTTAA CTACGTCACC GATAGCTTTA TGGGATTTAG AGCAGGTGCT
ACGTTTCAAT CGAGCGCAAC GCCGTTCGTG GATGATGATG GCAAAACGAT GTTTAAAAAA
GATATGTGGG CGCAAGGGGC ACAACTCTCT GAAGCCTATC TTGCGTATGC TTTAGGTAAA
ACCGATGTCA AAGTAGGGCG TATGTATATG GGAACACCGC TCATTGCAGG CAGTGGCTCA
CGCCTCATTC GTGAGTCCTT TGAGGGAGCG CTTATTACCA ACAAAGATAT TCCTGATACC
ACTTTAGGTG CAGTTTACAT CGACAAATTT CAAGCACGTA CCAACCGAGA TGGCGACATT
GGCGAGTTTG AAGATTATTA CGATGGAATG TACTCTCTTT ATGCGATTAA CAAATCTATT
GCGGGACTCA CCCTCACAGG TGCATGGGCA TACATGAACG ATGACAACAC GCTAAATTCT
AACCTCAATA TTTACAACCT TGAAGCCCTC TATGCCAATA AAATAGGTGT ATTTGGTTAT
AACCTAGGCG CTCAATACTG GTTCAATGAC TATGGCTCTG TCAGTGCAGG CGAAGATGAC
TCTATCGCTG GCTATGGTCT AAAAGCGGGG GCAAGTTATG CAGACCTTAG TGGTTATATT
GCTTACTCTA AAATCTCCGA TGATGATAAC ACCCCAATGG GTCAATTACT CCATGGTGCG
GGCAATGGTA CAGACCTTAT CTATACAGCT TCCATCATCG GTTCATACAG TTACTATGCT
GATATGAAAG CCTATGCAGC AGGTTTGGAT TACAAAATCA ATCCTTCCGC CCATATTGGT
ACGGTGTATG TTACAACCAC ACACGATGCC AATTTTGCAG CCGACGCTGA CGTCTCTTAC
ACAGGTTTTT ACGCCTCTTA CAGCTTTAAT GGAGCACTTA AAGGCTTAAG TGTTGTCGCA
CAATACGAAA CGATTGGTCA AGACGCCGAT GGCGACCAAT TCCGCTTTAA AGGCTCTTAT
AAATTCTAA
|
|---|
| Protein sequence | MKFSRLSLVA MAALATLSNN AFAADNLEDA FKNGKVAGEI RAYYFSKDIP NDHKGHEDIF
ATGLMLNYVT DSFMGFRAGA TFQSSATPFV DDDGKTMFKK DMWAQGAQLS EAYLAYALGK
TDVKVGRMYM GTPLIAGSGS RLIRESFEGA LITNKDIPDT TLGAVYIDKF QARTNRDGDI
GEFEDYYDGM YSLYAINKSI AGLTLTGAWA YMNDDNTLNS NLNIYNLEAL YANKIGVFGY
NLGAQYWFND YGSVSAGEDD SIAGYGLKAG ASYADLSGYI AYSKISDDDN TPMGQLLHGA
GNGTDLIYTA SIIGSYSYYA DMKAYAAGLD YKINPSAHIG TVYVTTTHDA NFAADADVSY
TGFYASYSFN GALKGLSVVA QYETIGQDAD GDQFRFKGSY KF
|
|---|
| |