| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_4838 |
|---|
| Symbol | |
|---|
| ID | 8606200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 5486478 |
|---|
| End bp | 5487680 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003302393 |
|---|
| Protein GI | 269129023 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCAGGCTCAT CGACGCGGTG CGGGAACGGC TCGCCGATGC CGGCGGCGAA
CCCACCGGCG GGCAGGTGGC CGCCGCCCTG CGGGCCGAGC GGAGGCTGCT CGGCGACCGG
GAGGTGCTCG CGCTGGCCGA CGAGTTACGA GCCGATCTGG CCGGGGCGGG CCCTCTGGAG
CCGCTGCTGC GCGCACCGGA GGTCACCGAC GTCCTCGTCA ACGGCCCCCA CGAGGTCTGG
GTGGACGCCG GAGCCGGGCT GGTGCGCACG GCGGTCCGTT TCCCGGATGA GACCGCCGTG
CGGAGGCTGG CGCAGCGCCT GGCGGCCAAG GCCGGCCGGC GGCTCGACGA CGCGGCCCCC
TGCGTCGATG CCCGCCTGCC GGGCGGGATC CGGCTCCATG CGGTGCTGTC GCCGGTGGCG
CTCGGGGGAA CCTGCCTGTC CCTGCGGCTG CCCCGGCGGC GGGCGTTCAC CTTGGAGGAG
CTGGTCGCCG CGCAGGCCGT CCCCGCGGCG GGCGCCGCGC TGCTGGCGGC GCTGGTGGCC
GCCCGCCTGG CGTTCCTGAT CACCGGGGGC ACCGGCACCG GCAAGACCAC CCTGCTCAGC
GGGTTGCTGT CGCTGGCCGA CCCCCGCGAA CGCCTCGTTT TGGTGGAGGA CTCCGCCGAG
CTGCGGCCCG AGCACCCCCA TGTGGTGCGG CTGGAGGCCC GCCCGCCCAA CGTCGAGGGC
GCCGGCGGGA TCACCCTGCA CGACCTGGTC CGGCAGGCGC TGCGCATGCG CCCGGACCGG
CTGGTGATCG GCGAGGTCCG GGGCCGGGAG GTGGTGGACC TCCTGGCGGC CTTGAACACC
GGCCACGAGG GCGGATGCGG GACGCTGCAC GCCAACACCG CGGCCGACGT CCCCGCCCGC
CTGGAGGCCC TAGGCTGCGC CGCCGGGCTG ACCAGGGAGG CGATTCACAG CCAGGCCGCG
GCCGCCCTCG ATGCAGTCGT CCACCTCGTC CGCGACGGCG CCGGCCGGCG CCGCGTCGCC
GAGATCCGCC TGCTGCGGCG CGGCCCGGAC GGGCTGGTCG AGGCCGTGCC CGCGGTCGCC
TTCACAGCGG ACGGCCGGCT GATCGCCGGA GCCGGGGCCG CCGCGCTGAC CGAGCTGCTG
GGAGACCACT GGAAGGCGGC CAGGAAGGTC TGGGAGGCCA AAGAAAGGAG CCGCGATGGC
TGA
|
|---|
| Protein sequence | MNAPRLIDAV RERLADAGGE PTGGQVAAAL RAERRLLGDR EVLALADELR ADLAGAGPLE
PLLRAPEVTD VLVNGPHEVW VDAGAGLVRT AVRFPDETAV RRLAQRLAAK AGRRLDDAAP
CVDARLPGGI RLHAVLSPVA LGGTCLSLRL PRRRAFTLEE LVAAQAVPAA GAALLAALVA
ARLAFLITGG TGTGKTTLLS GLLSLADPRE RLVLVEDSAE LRPEHPHVVR LEARPPNVEG
AGGITLHDLV RQALRMRPDR LVIGEVRGRE VVDLLAALNT GHEGGCGTLH ANTAADVPAR
LEALGCAAGL TREAIHSQAA AALDAVVHLV RDGAGRRRVA EIRLLRRGPD GLVEAVPAVA
FTADGRLIAG AGAAALTELL GDHWKAARKV WEAKERSRDG
|
|---|
| |