Gene Tcur_3935 details

Gene Information

• Locus tag: Tcur_3935
• ID: 8605289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermomonospora curvata DSM 43183
• Kingdom: Bacteria
• Replicon accession: NC_013510
• Strand: -
• Start bp: 4479100
• End bp: 4481139
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 71%
• Product: transcription termination factor Rho
• Protein accession: YP_003301502
• Protein GI: 269128132

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGAAT CCAGCGAACT CCTTACGGAC ACCTCCAGCC CCGCAGCTGA GAACACCGCG 
GACCGGCCGG AGCGCCCCAC GACGCGGCGC CGGCGTTCCG GCACCGGCCT GTCGGCGTTG 
GTGCTGCCCG AACTCAGGAC GCTGGCCGCC CAGCTCGGCA TCACCGGCAC CACCGGGATG 
CGCAAGAGCC AGCTCATCGC CGCCATCGAG GCCAAGCAGG GCGGACCCGT CACCGGGCCG 
AGCACCGCCA AGTCCGAGCC CAAGTCCGAG GCCAAGGCCG AGACCGAGTC CACGTCGCCG 
AGCGAGCCCA AGACCGAGCC CAAGAGCGAG CCGGCCGAGT CCAAGGCGAG CCGGGACGAC 
AAGGCGGCCC AGGCGGACAA GGCGGAGGAG ACCGCCTCCC GCTCCGAGGA GCAGGCCGAC 
GCGGGCGCGG CCGAGAGCCG TCCGGCGCGC ACCCGCCGCA CCCGTTCCGC CAAGCGCGAG 
GAGGGCGAGG AACAGCTCGC CATCCCCGAG GAACAGCAGG CCGACAAGCC CGCCGACAAG 
TCCGCCGACA AGGCGGCCGA CAAGGCGGCC GACAAGGACA AGCAGGACGA CAAGGCGGAG 
TCCGCCGACA AGAGCGCCGA CAAGCCCGCT GACAAGACCG CGGAGAAGAC CGAGCGTGGG 
GAGCGCGCCC GGACCGCCGG CGAGGAGGGC GAGGGCAACG GGCGCGAGGG CCGTCAGCGC 
GGCCGGGGCG GCCGGGAGCG CGGCGAGCAG CAGCAGAACG GCCAGCAGCG CCGCGGCCAG 
AACGGCGCCG CCGAGGAGGA GAACGGCGAA AGCGGCCGCA GCCGCCGGGG CCGCCGCTTC 
CGGGAGCGCA ACCGCGGCCG CGGCGGCCGG GGCGAGCGGT ACGAGGAGCC GGTGATCAAC 
GAGGACGACG TGCTGATCCC GGTGGCCGGC ATCCTCGACA TCCTGGACAA CTACGCGTTC 
GTCCGCACCA CCGGCTACCT GCCCGGCCCC AACGACGTCT ACGTCTCGCT GTCCCAGGTC 
CGCAAGTACG GGCTGCGCAA GGGCGATGTG ATCACCGGTG CGGTGCGCCA GCCGCGCGAG 
GGCGAGCGGC GGGAGAAGTT CAACGCGCTG GTCCGCTTGG ACACCGTCAA CGGCATGGAG 
CCCGAGCAGG CCAAGAACCG CGTGGAGTTC TCCAAGCTCA CCCCGCTGTA CCCGCAGGAG 
CGGCTGCGGC TGGAGACCGA CCCGAACGTG CTGACCACGC GGATCATCGA CCTGGTCTCC 
CCGATCGGCA AGGGCCAGCG CGGCCTGATC GTCTCCCCGC CCAAGGCGGG CAAGACGATG 
GTGCTGCAGG CGATCGCCAA CGCGATCACC AAGAACAACC CCGAGTGCCA CCTGATGGTG 
GTGCTGGTGG ACGAGCGGCC CGAAGAGGTC ACCGACATGC AGCGGTCGGT CAAGGGCGAG 
GTCATCCACT CGACCTTCGA CCGTCCGGCC GAGGACCACA CCACCGTCGC CGAGCTGGCC 
ATCGAGCGGG CCAAGCGGCT GGTGGAGCTG GGCCACGACG TGGTGGTGCT GCTGGACTCC 
ATCACCCGGC TGGGCCGCGC CTACAACCTG GCCGCCCCCG CTTCCGGGCG CATCCTGTCC 
GGTGGTGTGG ACTCCACCGC GCTGTACCCG CCCAAGCGGT TCTTCGGCGC CGCCCGCAAC 
ATCGAGAACG GCGGTTCCCT GACCATCCTC GCCACCGCGC TGGTGGAGAC CGGGTCCCGC 
ATGGACGAGG TCATCTTCGA GGAGTTCAAG GGCACCGGCA ACATGGAGCT CAAGCTCAAC 
CGGCAGCTCG CCGACAAGCG GATCTTCCCC GCGGTGGACG TGGAGGCCTC CGGCACCCGC 
AAGGAGGAGA TCCTCATGTC CCCCGAGGAG CTGCGCATCG TCTGGCAGCT GCGCCGGGTG 
CTGCACGCCC TGGACACTCA GCAGGCCCTG GAGCTCCTCA TCGAGAAGAT GAAGGAGACC 
AAGTCCAACG CCGAGTTCCT GCTCCAGGTG CAGAAGACCA CGGTCGCCGA CCGGGACTGA 

 

Protein sequence

MSESSELLTD TSSPAAENTA DRPERPTTRR RRSGTGLSAL VLPELRTLAA QLGITGTTGM 
RKSQLIAAIE AKQGGPVTGP STAKSEPKSE AKAETESTSP SEPKTEPKSE PAESKASRDD 
KAAQADKAEE TASRSEEQAD AGAAESRPAR TRRTRSAKRE EGEEQLAIPE EQQADKPADK 
SADKAADKAA DKDKQDDKAE SADKSADKPA DKTAEKTERG ERARTAGEEG EGNGREGRQR 
GRGGRERGEQ QQNGQQRRGQ NGAAEEENGE SGRSRRGRRF RERNRGRGGR GERYEEPVIN 
EDDVLIPVAG ILDILDNYAF VRTTGYLPGP NDVYVSLSQV RKYGLRKGDV ITGAVRQPRE 
GERREKFNAL VRLDTVNGME PEQAKNRVEF SKLTPLYPQE RLRLETDPNV LTTRIIDLVS 
PIGKGQRGLI VSPPKAGKTM VLQAIANAIT KNNPECHLMV VLVDERPEEV TDMQRSVKGE 
VIHSTFDRPA EDHTTVAELA IERAKRLVEL GHDVVVLLDS ITRLGRAYNL AAPASGRILS 
GGVDSTALYP PKRFFGAARN IENGGSLTIL ATALVETGSR MDEVIFEEFK GTGNMELKLN 
RQLADKRIFP AVDVEASGTR KEEILMSPEE LRIVWQLRRV LHALDTQQAL ELLIEKMKET 
KSNAEFLLQV QKTTVADRD