| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3823 |
|---|
| Symbol | |
|---|
| ID | 8605176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 4373759 |
|---|
| End bp | 4375057 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_003301392 |
|---|
| Protein GI | 269128022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC GGATCCTGAT CAACGTCGCG GCCTTCGCGG CCCTGGGCGT GGTCCTGGTG
GTCTGGGCCT TCAGCAGTGT GGTGCGGTTC GACTTCATCG AGCGGCCCTA CCAGATCACC
GTGGTGTTCG AGTCCTCGCC GGGGCTGCAC CCCAACTTCG AGGTGGACTA CCTGGGCACC
CGGATCGGCA AGATCGACTC GGTCCGGCTG CGTGACGGCC AGGTGGTGGT GAAGCTGGAC
ATCGACCGCA ACGTGCGGAT CCCGCGCGCG GTGACCGCCG CGGCGGCCCG CAAGTCGGCG
GTCGGCGAGC CGGTGGTGGA GCTGACCCCC AAGCCGGGCC AAGCCGACGG CCCGCGGATG
CCCACCGACG GCTCGGGGCT GATCCCGGTC ACCGACACCT CCGTCCCGCC CAAGTACGGC
GACCTGTTCG GCGCGGTCAA CAAGACCCTC AAGGCGATCG ACCCCGACTC GGCCGGCAGC
CTGCTGCACG AGCTGGCGGT GGGCTGGGCC GGCCGGGAGG ACTCGCTGCG GCAGATCATC
ACCGGAAGCG ACCAGATCAC CGCCACGTTC GCCCGGGACA CCGAGCTGGT GGACCAGCTG
ACCGCGGACA TGGGCCGGAT CGCCGCCGTG CTGGCCGACA ACCGCCGGCA GCTGGGCTCG
GGGATCGACG ATCTGGCGGC GCTGACCGCC GCGCTGCGGC AGGTGCGCGG GGAGATCGCC
CGGCTGCGCG ACCGCGGCCC GAACCTGCTG GCCACCGTCA ACGGGCTGCT GGCCGAGACC
GGCCCCGACA TCAACTGCGC GGTGGACGCG CTGGCCGGCA TGGACCTCAC CAAGCACAAC
CCCGGCCTGT ATGAGGACCT GCGGCAGACC CTGGTCATGG CCGGGCCGCT GGTGAACGTG
CTCACCAACA TCATCGGCGA GGACCAGGGC CAGAAGGTCC TCAACATCGT GTTCATGATG
ACCTTCAACG CCAAGGCGAC GCTGGAGTAC AAAAAGCCGC TGCCGCAGCC GACGGTCGCC
GAGATCCCCA CCTGCGCGGA CGGCCGCCAG CCCGGAAAGG CCAAGCAGAA GGACTTCCAA
GGCAAGGACC CCGGCGATAC GCTGCCCCCC CATGACCCGT CCGCCCAGCA GCAGACCGCC
GGCCGGCACC TGGCCCGCCC GGCTTCCGGT GCCGCGCCCG AGCCCGGCGG CCCGCCGATG
TGGCTGGTGT ATCTGCCGCC GCTGCTTGCG CTGCTGGTGC TGGCCAAGGT CATAGTGGGC
TCGATCCCCG TGCTGTCCCG CCTGCGCCGA CGCAGGTGA
|
|---|
| Protein sequence | MNSRILINVA AFAALGVVLV VWAFSSVVRF DFIERPYQIT VVFESSPGLH PNFEVDYLGT
RIGKIDSVRL RDGQVVVKLD IDRNVRIPRA VTAAAARKSA VGEPVVELTP KPGQADGPRM
PTDGSGLIPV TDTSVPPKYG DLFGAVNKTL KAIDPDSAGS LLHELAVGWA GREDSLRQII
TGSDQITATF ARDTELVDQL TADMGRIAAV LADNRRQLGS GIDDLAALTA ALRQVRGEIA
RLRDRGPNLL ATVNGLLAET GPDINCAVDA LAGMDLTKHN PGLYEDLRQT LVMAGPLVNV
LTNIIGEDQG QKVLNIVFMM TFNAKATLEY KKPLPQPTVA EIPTCADGRQ PGKAKQKDFQ
GKDPGDTLPP HDPSAQQQTA GRHLARPASG AAPEPGGPPM WLVYLPPLLA LLVLAKVIVG
SIPVLSRLRR RR
|
|---|
| |