| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3490 |
|---|
| Symbol | |
|---|
| ID | 8604839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 4006714 |
|---|
| End bp | 4008114 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
|---|
| Protein accession | YP_003301066 |
|---|
| Protein GI | 269127696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.46611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA CCAAATTCGG GCGCCTGGCA GCCGGCGCCC TGGCCCTTGC CATGGTCACC
ACCTCGTGTG CCAGTGAGCG TTCCGGCGAC GACGGCGTGA GCGCCGGCGG CGGCCAGAGC
TCCGGCGGCG GCCGCTACTT CGGCACGCTG CCGTCCCCCT GCGGGCCCGG CGACGCCAAG
GGCGCCACCG ACCAGGGCGT CACCGACACC ACCATCACCA TCGGATTCGG CGACGACCGC
GGCTTCGCCT CCGCGCCCGG CCTGTCCAAG GAGATGGGCG ACGCGGTCAA GGCGATGATC
GACTGGTGCA ATGAGCAGGG CGGCATCAAC GGCCGCAAGA TCAAGGGCAA CCAGTACGAC
GCCGCCTACA CCAACTCGGT CAAGGTCATC CAGCAGTCCT GCAAGCAGGA CTTCATGCTG
GTCGGCCAGG GCTTCGCCAT GGACGAGGCC GCCGAGCAGC ACCGGGTGGC CTGCAAGCTG
CCCACCGTCG CCGGCTTCAC CGTCGGTCCC AACGCCACCA TGGGCCCGAT GAAGTACGAG
GCCGTCCCCT ACCCGGTGGA CCTGATGAAC GTCGGCGGGC TGCGCATCGC CGAGAAGCTG
TTCCCCGAGG CCAAGGAGAA GGCCGACATC CTGCTGTCCA CCTCGCCGGC GGTGACCATG
GGCACCAACA AGGTCTCCGC GGCGATGAAG AAGCTCGGCT ACAAGCAGCT CAACTGCGGC
GTCCGGCTCA ACGACGCCGG GGAGAGCAGC TACATGCCGC ACGCCGAGAA GATCAAGAAG
TGCGGCGCCG AGCTGCTGTG GAGCTCCGAC TCCCCCGACC CCGGCCAGTT CAGCCTGCTG
GAGTCGATCG AACGGGTCGG CGCCAAGCCC AAGTACCTGT TCGAGGCCAC CTGGTACAGC
AGCCTCGTCG CCCAGTGGAA CAAGGCCGGC ACCGGCGACA ACATCCACAT CGCCATGATC
TTCCAGCCGC TGGAGAACGC CGACAAGGTC CCGGCGGTCA AGCAGTACAT GGACCTGGTC
AACGCCCAGA AGGGCAAGGT CGCGCTGCTG GGCATGCAGG CCACCTCCTC GTTCCTGCTG
TGGGCGCAGG CCGCCAAGAA CTGCGGCTCC AACCTCACCC GCCAGTGCGT GATCAACGAG
CTGTCCAAGG TGCACGAGTG GACCGGCGGC GGGCTGCACG CCCCCACCGA CCCCGGCGCC
AACAAGCCGT CCTCCTGCGC CCTGATGGTC AAGCTCACCG GCACCAAGTA CGAGCAGGTC
TACCCCAAGA CCATCGGCGA GTACGAGTGC AGTGACGACA TCGTGCTGGA GACCGACCCC
AAGACCTGGG GCACCAAGCT CAACGAAGAC CGGGTGGCGA CCACGTTCCT GACCGACGAC
GTGATCAAGC CACAGTCCTG A
|
|---|
| Protein sequence | MKVTKFGRLA AGALALAMVT TSCASERSGD DGVSAGGGQS SGGGRYFGTL PSPCGPGDAK
GATDQGVTDT TITIGFGDDR GFASAPGLSK EMGDAVKAMI DWCNEQGGIN GRKIKGNQYD
AAYTNSVKVI QQSCKQDFML VGQGFAMDEA AEQHRVACKL PTVAGFTVGP NATMGPMKYE
AVPYPVDLMN VGGLRIAEKL FPEAKEKADI LLSTSPAVTM GTNKVSAAMK KLGYKQLNCG
VRLNDAGESS YMPHAEKIKK CGAELLWSSD SPDPGQFSLL ESIERVGAKP KYLFEATWYS
SLVAQWNKAG TGDNIHIAMI FQPLENADKV PAVKQYMDLV NAQKGKVALL GMQATSSFLL
WAQAAKNCGS NLTRQCVINE LSKVHEWTGG GLHAPTDPGA NKPSSCALMV KLTGTKYEQV
YPKTIGEYEC SDDIVLETDP KTWGTKLNED RVATTFLTDD VIKPQS
|
|---|
| |