| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3344 |
|---|
| Symbol | |
|---|
| ID | 8604690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | + |
|---|
| Start bp | 3861944 |
|---|
| End bp | 3863659 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003300920 |
|---|
| Protein GI | 269127550 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00370475 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACC GAGCACCGGA CGAGACCCAG GAGGTGGCGC TGCCGGAGGA CGGCCGAGGC
GGCTCGCCCG AACAGACCCG CCTGGAGGCG GCGGCCGAGG AGACGCCGTC CCCGGCTAAG
TGGCCGGAAC CGTCCGCGCC CGGCTCCGCG AAGGCGACGG CTCCGCAGGC CGTTCCGCAG
GAACCGGACG CCCCTCGCTC GGCGCCCCAG GAGCGGCCGG CATACGCCAT GTGGTACGCC
GACTACCAGG AGCCGGCGCA GGAGCCCGCC GGGCCGTCTG CACAGGAGGA CGCGCCGCAG
CCGGAGCCGG ACGAGCAGCC CGAGCCACCG GAGCCGCCCG CCTCCCGGCA GCAGGACTCC
GAAGAGCCGG CCGACTCCGA GCAGGTGGAA GAAGACGGGC AGACCGCGCC GCAACCCCTG
CCCGCTTCTC AGCAGCAGAA GGACTTCGCG CAGGCGGCCG AGCAGCAGGA CGCTGCGCAA
GCGTCCACTG CCGCAGAGCA ACAGCCGCAC CCCCTGCCTG AGGCCGAGCG ACCGGAGGCC
GACAAGCAGA CCGCACCACA GACGCTGCCC GCACCCCAGA AGCAACCAGA CCGCGCGCAG
ACGGACACCG GACAGCCAGG ACCATCCGCG CCACAATCTC CTTCGGAGCC CCAGCCCACC
ACCGGGCAGT CGGAGGCCGA CAAGCAGACC GCACCACAGA CGCTGCCCGC ACCCCAGAAG
CAACCAGACC GCGCGCAGAC GGACACCGGA CAGCCAGGAC CATCCGCGCC ACAGTCTTCT
CCGGAGCCCC AGCCCACCAC CGGGCAGTCG GAAGCGGACA AGCAGACCAC GCCGCAGCCT
CTGCCCGCAC CTCAGCGGCA GACGGATTCC GCCCAGCCGG GAGCCGATGG GCTGACCGTC
CCTCAGGGGC TGCCCCTCCC GCGGCGACCG GCCGCCGCAA GGGAGCCGGG AGCCGATCAG
CGAACCGCCC CTCAGGCGCC CCCCGTCCCG CCACAGCGGC CGGATCCCGG GCAAACGGTC
GTCGACCAGC CGGCCGCCCT GCCGGCGTCG TCCATTTCCC AGCAGCAGTG GGCCCCGCCG
CAGCAGCCGC TTCCGGAGCT GCCCGACGAG CAGGCGCGGC GCGGGGCCTT CCACCGCTTC
CACTACCCGA TCGGGATCTT CCTGACGGCC TTCGGGGGCA GCGCTCTGCT GATGTCCCTG
CTGGGCTGGC CCGCCCACCT CAAGGAGATG ACGTTCTATC TGGGCGAGAG CCTCGCCTCC
CCGGCGCTGA TCGCGGTCAA GGCGGTGCAG GTCCTGCTGG TCCTGCTGAC CGTGGTCGGG
CTGGCGCGCC GCCGGGACGT GTGGCTCCTG ATGGCGTTGT CGGGCTGGGC CGCGGGGTTC
GCCGCGTTCT GCGTGCTGGA CGTGGTCAAG GGCAGACTCG CCGACCTCGC CGAGCACGGC
CTTTATGCGG TGGTGTTCGC CGCCTTGCTG TTCCTGTCGT ACGCGCTGGG CGTCAAGGCC
CGGGTGGCGG CCCGCAGCGA GGGGCCGCCG GAGCCGGGAC AGGGCCAAGG CTCCGGCTTG
AGCCGCACTC AGGAGATCGC GCTGGCCGCC TTGAATCGCT GGCAGCGGCA GCAGCCCGCC
CCCCGGCCGC CCGCTTTGCA GCAGCCGCCG GAGGCCGGGC AGCGGCCCGC CCCGGCCTCG
CAGCCGCAGG GGACGGCGCC GCCCGGACGG CCGTAG
|
|---|
| Protein sequence | MTDRAPDETQ EVALPEDGRG GSPEQTRLEA AAEETPSPAK WPEPSAPGSA KATAPQAVPQ
EPDAPRSAPQ ERPAYAMWYA DYQEPAQEPA GPSAQEDAPQ PEPDEQPEPP EPPASRQQDS
EEPADSEQVE EDGQTAPQPL PASQQQKDFA QAAEQQDAAQ ASTAAEQQPH PLPEAERPEA
DKQTAPQTLP APQKQPDRAQ TDTGQPGPSA PQSPSEPQPT TGQSEADKQT APQTLPAPQK
QPDRAQTDTG QPGPSAPQSS PEPQPTTGQS EADKQTTPQP LPAPQRQTDS AQPGADGLTV
PQGLPLPRRP AAAREPGADQ RTAPQAPPVP PQRPDPGQTV VDQPAALPAS SISQQQWAPP
QQPLPELPDE QARRGAFHRF HYPIGIFLTA FGGSALLMSL LGWPAHLKEM TFYLGESLAS
PALIAVKAVQ VLLVLLTVVG LARRRDVWLL MALSGWAAGF AAFCVLDVVK GRLADLAEHG
LYAVVFAALL FLSYALGVKA RVAARSEGPP EPGQGQGSGL SRTQEIALAA LNRWQRQQPA
PRPPALQQPP EAGQRPAPAS QPQGTAPPGR P
|
|---|
| |