Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_3218 |
Symbol | |
ID | 8604564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | + |
Start bp | 3720065 |
End bp | 3721954 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | glycoside hydrolase 15-related protein |
Protein accession | YP_003300795 |
Protein GI | 269127425 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGACCGA CGGTCGCCGG CGGCAGAGCG GGAGAGCCGT TCGCCCCCAT AGCCGACTAC GGTTTCCTCT CGGACTGCGA GACGACCGCG CTGATCGCAC CGAGCGGGAA CGTCGAGTGG ATGTGCCTGC CGAGGATGGA CTCCCCCAGC GTCTTCGGGT CGATCCTGGA CCGGGACGCC GGGTACTTCC GGGTCGGCCC GGCCGGGGTC GAGGTGCCCG CGGCCCAGCG CTACATCCCG GGCACCATGG TGATGGAGAC CACCTGGTGG ACCCACGGCG GGTGGCTGGT GGTGACCGAC GCGCTGCTCA TGGGCCCCTG GCACCACGAG ACGGAGCGTT CCAAGACCCA CCGCCGGGCG CCCACCGACT ACGACGCCGA CCACGTGCTG CTGCGCATGG TCCGCTGCGT CAACGGCCAG GTCCAGGTGC GCCTGGACTG CATGCCGGTG TTCGACTACG GGCGCGTCCC GGCCCGCTGG GAGCACACCG GCGACGGCTA CCACGAGGCG GCCTGCCACG GCAACGGGCT GACCCTGCGG CTGACCACCG ACATGAACGT CGGCTTCGAA GGGTCGCTGG CCACCGGGCG CACCCTGCTC AAGCAGGGCG ACACCCGCTT CGTGGCGCTG TCGTGGAGCG AGCACGAGCC GCCGCACACC TACGCCGAGG CGCACGAGCG GCTGGTGTGG ACGGTGCACC ACTGGCAGCA CTGGCTGGAC CGCGGCAAGT TCCCCGACCA CCCCTGGCGC AGCCACCTGC AGCGCAGCGC CCTCACCCTC AAGGGCCTGA CGTTCGCCCC CACCGGCGCG GTGGCCGCGG CCGCCACCAC CTCCCTGCCG GAGACCCCCA AGGGCGAGCG CAACTGGGAC TACCGCTACA CGTGGATCCG CGACTCCACG ATGGCGCTGT GGGCCTTCTA CACCCTCGGC TTCGACTGGG AGGCCAACGA CTTCTTCTAC TTCATCACCG ACGTGGCCGA GGCCGCCGAC GGCCGGCTGC AGATCATGTA CGGGGTGGAC GGCCGGGAGG AGCTGCCGGA GACCACCCTG GACCACCTGA GCGGCTACGA CGGCGCCCGC CCGGTGCGCA TCGGCAACGA CGCCTACACC CAGGCCCAGC ACGATGTGTG GGGCGCCATC ATCGGCTCCA TCTACCTGTT CGTGCGGCGC CGCGACCGGC TGGACGACCG GCTGTGGAAG ATCATCGTCA AGCAGGTCGA GGAGGCGCTG GCCAACTGGC GCAAGCCCGA CTGCGGCATG TGGGAGGTGC GCGGCAAGCC CCAGCACTTC ACCTCCTCCA AGGTGTTCTG CTGGGTGGCC GCCGACCGCG GCGCCCGCCT GGCCCGCATC CGCGGCTGCC ACGACCTGGC CGAGCGCTGG CAGAAGGCGG CCGATGAGAT CCACGCCGAC GTGCTGGCCA ACGCCCTGGA CGAGCGGGGG GTCTTTACCG CCCACTACGG CACCAAGGCG CTGGACGCCT CGGTGCTGCT GATCCCGCTG CTGGGCTTCC TGCCCCCCGA CGACAAGCGG GTGCGCGAGA CGGTGCTGGC CATCGCCAAC GAGCTCACCG AGGACGACCT GGTGCTGCGG TACCGGCCCG AGGAGACCGA CGACGGGTTC TCCTCCTCGG AGGGCACCTT CACCATCTGC TCGTTCTGGC TGGTCAGCTC CCTGGTGATG ATCGGCGAGC TGGAACGCGC CAAGCGTTTG TGCGAGAAGC TGCTGTCGTA CGCCAGCCCG CTGCAGCTGT ACGCCGAGGA GATCGACCCG CACACCGGGC GGCACCTGGG CAACTTCCCG CAGGCCTTCA CCCACCTGTC GCTGATCAAC GCGGTGATGC ACGTGATCCA GGCCGAGCGT CCCGAGGGCC CGCCCGGCGC GTTCGCCTAG
|
Protein sequence | MRPTVAGGRA GEPFAPIADY GFLSDCETTA LIAPSGNVEW MCLPRMDSPS VFGSILDRDA GYFRVGPAGV EVPAAQRYIP GTMVMETTWW THGGWLVVTD ALLMGPWHHE TERSKTHRRA PTDYDADHVL LRMVRCVNGQ VQVRLDCMPV FDYGRVPARW EHTGDGYHEA ACHGNGLTLR LTTDMNVGFE GSLATGRTLL KQGDTRFVAL SWSEHEPPHT YAEAHERLVW TVHHWQHWLD RGKFPDHPWR SHLQRSALTL KGLTFAPTGA VAAAATTSLP ETPKGERNWD YRYTWIRDST MALWAFYTLG FDWEANDFFY FITDVAEAAD GRLQIMYGVD GREELPETTL DHLSGYDGAR PVRIGNDAYT QAQHDVWGAI IGSIYLFVRR RDRLDDRLWK IIVKQVEEAL ANWRKPDCGM WEVRGKPQHF TSSKVFCWVA ADRGARLARI RGCHDLAERW QKAADEIHAD VLANALDERG VFTAHYGTKA LDASVLLIPL LGFLPPDDKR VRETVLAIAN ELTEDDLVLR YRPEETDDGF SSSEGTFTIC SFWLVSSLVM IGELERAKRL CEKLLSYASP LQLYAEEIDP HTGRHLGNFP QAFTHLSLIN AVMHVIQAER PEGPPGAFA
|
| |