| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_2969 |
|---|
| Symbol | |
|---|
| ID | 8604313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 3452418 |
|---|
| End bp | 3454034 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, CdaR |
|---|
| Protein accession | YP_003300549 |
|---|
| Protein GI | 269127179 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00320725 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGAGG TGCTGGGCGT GTCCACACTG GCCGGGGCCC GCCTGATCGG CGGCTGCGCC
GGACTGGAGC GTATCGTGCA GCGCCTCAAC GTCATGGAGG TCCCCGACAT CCTGGCCTGG
GTCAAGCCGC ACGAGCTGCT GCTGACCACC GGCTATCCGC TGCGCCACAC CCCCCAGTCG
CTGGAGAACC TGGTCGCCGA CCTGGACGCG CGCGGGGTGT CGGCGCTGGG CATCAAACTG
GGCCGCTACC TGGACGCCCT GCCGCCGCGG ATGATCGAGC AGGCCGACCG GCTGGGCTTC
CCGCTGATCC TGCTGCCCGC CGACGTGGGG TTCGACGACA TCCTCAACCA GGTCCTCACC
GACATCCTCA ACCGGCAGGC GGCGGTGCTG GCCCGCACCG AGGAGGTGCA CCGGGCGCTG
GTGCAGATCG TGCTGAGCGG CGGCGGACTG CAGGAGGTGG TCGACGAGGT CGCCGCCCTG
CTGGAGGTGG CGGTGGTCGC CATGGACGGG GAGCGGCGGA TGCTGGCCGG CTGCGGCCCC
GACGAGCACC TGCGGGCCAT GCTGGAGTGG GACGGCCCCG CCGACCCGGC CGGCCCGGTC
ACCGACGGCG AGCACCTGAT GGTGCCGGTG CTGGCCGGCG GCCTGGACCA CGGCCGCATC
GTCGCCTACG GCGCCGGCGG CGGGCTGCGC GCCAGCGACG TGGTGGGCAT CCTGGAACGG
GCCGCCACCG TGGTGGCGCT GCTGATCACC AAACAGCAGG CGGTCGCCGC CGTGGAGAGC
AAGTACCGCG CCGACTTCCT GCGGGACGTG CTGGCCGGGC GGGCCGGCGA GGACGGCCAG
GTGATCGCCC ACTGCTCGGG GTTCGGCTGG GACCTGGACC GCCCGATGAC CGTGCTGGTC
GCCGAGCTCG ACGGGCGGGA CGATGCGGCG GACGGCACCG GCGGCCGCGC CGGGCGCCGG
GACCGCGGCG CCGATGAGCG CCTGGTGCAG GAACGGCTCG CCGCGGCCTG GACGTCGGTG
GTGCGCCGGC ACGACCGGCA CGCCGCGGTG GCGGGTTTCG CCAACGAGGT GGTCGCCGTC
GTGGGCGCGC CGGAGGAGGG CGGCGCGGCC CCCGACCCGG CGGTGCTGGT ACGGGAGGCG
GCGGCGGTCT TCTCCGAGCC GCATGGCGCG CGCCACACCT TCTCCACCGG CATCAGCCGC
ACGGTGACCT CCCCCTCCCG GCTGCCGGAG GCCTATGAGC AGGCCGTCAA GGCGGTGCGG
GTCGGCCGGC AGATGCACGG CGCCGGGGCG CGCGTCCACT TCGACCAGCT GGGCGTCTAC
CGGCTGCTGA GCCTGGTCCC CGACCCGGCG GAGCTGCACG CCTTCGTCCG GGAGACGCTG
GGCGAGCTGG CCTGCGACGA CGAGCCGGAG GCGGTCGATC TGCGCCGCAC CCTGCAGGTG
CTGCTGGAGA CCAATCTCAA CGTCGCCGAG ACCGCCCGCC GGCTGCACTT CCACTACAAC
ACCCTGCGCT ACCGCATCGG CAAGCTGGAG CGCATGCTCG GCCCCTTCAC CGAGGACGCC
CACCTGCGGC TGAATCTCAC CCTCGCGCTG CACGTGCTCC GCATGAAGGG GATCTGA
|
|---|
| Protein sequence | MGEVLGVSTL AGARLIGGCA GLERIVQRLN VMEVPDILAW VKPHELLLTT GYPLRHTPQS
LENLVADLDA RGVSALGIKL GRYLDALPPR MIEQADRLGF PLILLPADVG FDDILNQVLT
DILNRQAAVL ARTEEVHRAL VQIVLSGGGL QEVVDEVAAL LEVAVVAMDG ERRMLAGCGP
DEHLRAMLEW DGPADPAGPV TDGEHLMVPV LAGGLDHGRI VAYGAGGGLR ASDVVGILER
AATVVALLIT KQQAVAAVES KYRADFLRDV LAGRAGEDGQ VIAHCSGFGW DLDRPMTVLV
AELDGRDDAA DGTGGRAGRR DRGADERLVQ ERLAAAWTSV VRRHDRHAAV AGFANEVVAV
VGAPEEGGAA PDPAVLVREA AAVFSEPHGA RHTFSTGISR TVTSPSRLPE AYEQAVKAVR
VGRQMHGAGA RVHFDQLGVY RLLSLVPDPA ELHAFVRETL GELACDDEPE AVDLRRTLQV
LLETNLNVAE TARRLHFHYN TLRYRIGKLE RMLGPFTEDA HLRLNLTLAL HVLRMKGI
|
|---|
| |