Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_2817 |
Symbol | |
ID | 8604160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | + |
Start bp | 3286386 |
End bp | 3288818 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | glycoside hydrolase family 65 central catalytic |
Protein accession | YP_003300400 |
Protein GI | 269127030 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0216244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACGC CTGAAATCCC CCAACCCATC TACGAGGTGG ACCCCTGGTG CATCTATGAG AAGGAACTGC ACCTGGACCG CCTCGCCCAG AGCGAATCGG TGTTCGCACT GTCCAACGGG CACATCGGAT TGCGCGGCAA CCTGGAGGAG GGGGAGCCCT ACGGCCTGCC CGGCAGTTAC CTCAACTCCT TCTTCGAGTT GCGCCCCCTG CCCTATGCCG AGGCCGGCTA CGGCTACCCC GAGTCCGGGC AGACGGTCAT CAACGTCACC AACGGCAAGG TGTTCCGGCT GCTGGTCGAT GACGAGCCGT TCGACGTCCG CTACGGCAAG CTGCACCGGC ACGAGCGCAA GCTGGACATG CGCGCCGGGA CGCTGACCCG CGAGGTGGAG TGGAGCTCCC CGGCCGACGA CAGGGTGCGC ATCACCACCA CGCGGCTGGT CTCGCTGACC CAGCGGGCCA TCGCGGCGTT CTGCTATGAG GTGGAGCCGG TCGAGGGCCC GGTGCGGATC GTGGTGCAGT CGGAGCTGGT GGCCAACGAG TCGCTGCCGC ACCTGGGCGA CGACCCGCGG ACGGCGGCGG TGCTGGAGCA CCCGCTGGTC AGCGAGGAGC ACGTGTCCAA CGGGCGGCGG GTGGTGCTGG TGCACCGCAC CCGGCGCAGC GGGCTGCGCC TGGCGGCCGG GATGACCCAT GAGATCAGCG GCCCGGAGCG GCTGGCGGTG GAGGCCGAGA GCTTCCCCGA CGTCGGCCGC GTCACCGTGG CCGCCCGGCT GGAGCCGGGG CAGCGGCTGC GGATCATCAA GTACCTGGCC TATGGGTGGT CCAGCCGGCG GTCCCGGCCG GCGTTGCACG ACCAGGTGGT GGCGGCGCTG GCGGACGCCC GGCTGACCGG CTGGCAGGGC CTGCTGGACC AGCAGCGGCG GTTTTTGGAC GAGTTCTGGA GCGGCGCCGA CGTGGAGGTG GACGGGGACC CGGAGGTGCA GCAGGCGGTG CGCTTCGGGC TGTTCCACAT CCTGCAGGCC GGGGTGCGGG CCGAGCGGCG GATGATCCCG TCCAAGGGGC TGACCGGTCC CGGCTATGAC GGGCACAGTT TCTGGGACAC CGAGACGTTC GTGCTGCCGG TGCTGACCTA CACCTATCCG GCGGCGGCGG CCGACGCGCT GGCCTGGCGG CACATGACGC TGCCGCTGGC CGAGGAACGG GCCCGCCAGC TCGGCCTCAA AGGGGCGGCG TTCCCGTGGC GGACCATCCG CGGCCAGGAG TGCTCGGGGT ACTGGCCGGC CGGCACCGCC GCCTTCCACA TCAACGCCGA CATCGCCGAC GCGGTGATCC GCTACCTGGA CGCCACCGAG GACACCGAGT TCGAACGGGA GATCGGCGTG GAGCTGCTGG TGGCCACCGC CCGGCTGTGG CGCAGCCTGG GCCACCACGA TGTGCACGGC GGGTTCCGGA TCGACGGGGT GACCGGGCCG GACGAGTACA GCGCCCTGGT GGACAACAAC GTCTACACCA ATTTGATGGC GCAGCGGAAT CTGCGCGCGG CGGCCGACAT CGCGATGCGC AACCCGGATG TGGCCGAGCG GCTGGGGGTG ACCACCGAGG AGGCCGCCTC TTGGCGGGAC GCCGCGAACG CGATGGTGAT CCCCTACGAC GAGCGGCTGG GCGTGCACCC GCAGAGCGAG AACTTCACCA ACCACGCGCG CTGGGACTTC TCCGAGACCA AGCCCGACCA GTACCCGCTG CTGCTGAACT TCCCCTACTT CGACCTGTAC CGCAAGCAGG TGGTCAAACA GGCCGACCTG GTGCTGGCCA TGCACCTGTG CGGGGAGGCC TTCACCCCCG AGCAAAAGGA GCGCAACTTC GCCTACTACG AGGCGATCAC CGTGCGGGAC TCCTCGCTGT CGGCGCAGAC CCAGGCGGTG ATCGCCGCCG AGGTGGGGCA GCTGGACCTG GCGCACGACT ACCTGGGCGA GACCGCCCTG ATGGACCTGC ATGACCTGGC CCGCAACACC CGGGACGGGC TGCACCTGGC CTCGCTGGCC GGGGCGTGGA GCGCGCTGGT GGCCGGGTTC GGGGGGATGC GGGCGCTGAA CGGGCGGCTG CGCTTCGCCC CCCGCCTGCC GGGCGGGATC AGCCGGCTGG CGTTCCGGAT GCGTTACCGG GGACGGCGGC TGTGCGTCAC GGTGACCTCC GAGCAGGCCC GCTATGAGCT GCACGAGGGT GACCCGATCA CACTGACCCA CCACGGCCGG GAGTTCGAGC TGGGCGGGGA ACCGGTCGAG CTGCCGATCC CGCCGATGCC GACGCCGCCG CGGCCGCGTC CGCCGCAGCC GCCGGGCCGC GAGCCGGCTC CGCGCCGCAC CGACCCGTCG GGGCGGCCGC TGCGCTCCCC GCGCGTGGGC GACCTGCAGC TGTCGCAGAC GCCGCCGGGT TAA
|
Protein sequence | MSTPEIPQPI YEVDPWCIYE KELHLDRLAQ SESVFALSNG HIGLRGNLEE GEPYGLPGSY LNSFFELRPL PYAEAGYGYP ESGQTVINVT NGKVFRLLVD DEPFDVRYGK LHRHERKLDM RAGTLTREVE WSSPADDRVR ITTTRLVSLT QRAIAAFCYE VEPVEGPVRI VVQSELVANE SLPHLGDDPR TAAVLEHPLV SEEHVSNGRR VVLVHRTRRS GLRLAAGMTH EISGPERLAV EAESFPDVGR VTVAARLEPG QRLRIIKYLA YGWSSRRSRP ALHDQVVAAL ADARLTGWQG LLDQQRRFLD EFWSGADVEV DGDPEVQQAV RFGLFHILQA GVRAERRMIP SKGLTGPGYD GHSFWDTETF VLPVLTYTYP AAAADALAWR HMTLPLAEER ARQLGLKGAA FPWRTIRGQE CSGYWPAGTA AFHINADIAD AVIRYLDATE DTEFEREIGV ELLVATARLW RSLGHHDVHG GFRIDGVTGP DEYSALVDNN VYTNLMAQRN LRAAADIAMR NPDVAERLGV TTEEAASWRD AANAMVIPYD ERLGVHPQSE NFTNHARWDF SETKPDQYPL LLNFPYFDLY RKQVVKQADL VLAMHLCGEA FTPEQKERNF AYYEAITVRD SSLSAQTQAV IAAEVGQLDL AHDYLGETAL MDLHDLARNT RDGLHLASLA GAWSALVAGF GGMRALNGRL RFAPRLPGGI SRLAFRMRYR GRRLCVTVTS EQARYELHEG DPITLTHHGR EFELGGEPVE LPIPPMPTPP RPRPPQPPGR EPAPRRTDPS GRPLRSPRVG DLQLSQTPPG
|
| |