Gene Tcur_1851 details

Gene Information

• Locus tag: Tcur_1851
• ID: 8603178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermomonospora curvata DSM 43183
• Kingdom: Bacteria
• Replicon accession: NC_013510
• Strand: -
• Start bp: 2168818
• End bp: 2170800
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 74%
• Product: type II secretion system protein
• Protein accession: YP_003299462
• Protein GI: 269126092

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00122698
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGACCG GGCGGCTGCT GGCGGTGCTG TGCGGCCTGG CGCTCCTGCT GCCCGCGGGG 
ACGGCGGGCG CCGCCGAGCC CGGCGGGCGG ATCAGCGCCC TGGAGGTGAT GGCGAACCGG 
GTCCAGTTCC TGTTCACCGC GCACGGCCTG CCGCCGAAGG CGGCGCTGGA CCCCGATTCG 
GTCACGGTGA CGGCCGCCGG ACGCACCCTG CCGGCGAAGG CCGAACCGCC CGGCTCGCCC 
CGCCCCGGCG GCCCCTCCCC CGGCGGGCGG AACGCGCGGG CGGTGATGCT GGTGCTGGAC 
ACCAGCGGGT CGATGAGCGC CGCCGACCTT GCGGCCGCCA AGGCGGGGGC GGTGGCCTTT 
CTCGACCTGC TGCCCGCCGA CGTGCCCGCG GGATTCACCA CCACCGGGAC GCCGACACGC 
CCCGTGATCG ATCCCACCAC CGACCGCCGG TCCCTGCGCA AGGCCCTCGG CCGGATGCGG 
ACGGGCGGGG AGACCGCCCT GTATGACGCG ATGTCCGCGG CGGTGGACCG GCTGGCGCGC 
GCCAACGCCG CGGAGGGCCG GCTCGTGGTG CTGTCGGACG GCAAGGACTC CGCCAGCACG 
AGCACGCTCG CCCAGGTGCT GGCCCGGCTG AAGAGGACCC GCATCGCGGC CGACGTGGTG 
GCCTTCAAGA CGGCGGCGAC GTCGGAGGGA ACGCTGCGGC AGCTGGCCGC CGACTCCGGC 
GGCCGCCTGC TGTCCTCGCC CGATCCCCGC CGGCTGAACG CCGCGTTCGC CGACGCGGCG 
GCCTCCTTCC GCCAGTCGAT GTGGATCACG GTCACGCTGC CGCAGTCGCT GCAGGGCACC 
GCGCTGCGGC TGGAGGTGCG GGTCCGGGCC GGAGACACCG CGATCAAGGC CACGGCGTCC 
GCGGCGGCCT CTCCCGCCGG GACCGCCGGG CCGCACGGCC GGACCTCCGC GTCCCCCCGG 
CATGCGGGGA CGGCCCCGGC GGACGCGGCC GGTCCCCTGG CCGGTCTGCC GCTGCCCGCG 
GTGCTCGGCG TCTGTTTCGC CGCGATCCTG CTGCTCATCC TGGTGGTGGG AGGTCTGGGC 
CGCAGGGAGC CGCCGGAATG GGCGGTGCGG ATCGAGCGTT ACCGGCTGCG GGCGCGGCCC 
TCCCCCGCCG AGCCCGATGC CGAGGAGTCC CGGGCGCGCA ACCCCCTGAT GCGCGGCGCG 
CTCACCCTCA GCATGAAGAT CACCGGCTCG GGCCGGCTGG CGCAGCGCCT GGCACAGGAC 
CTGGACCGGG CCGGAATCTT GCTGCGTCCC CATGAGTGGA CCCTGCTGCG GATCGTCATC 
GGGGCCTGCC TGACGGCGGT GGTGACCCCG CTGGTGGGCA ACGTCCTCCT CGCCGCCCCT 
CCGGTGGCCG TGATCACCTG GGTCGCCACC CGGGCCTATC TGCGTGGCAG GGCCGAACGG 
CGGCTGACGG CGTTCGCCGA CCAGCTGCCG GATGCGCTGC AGCTGGTCGC CGGGTCGCTG 
CGGTCCGGTT TTTCGGTCGC CCAGTCGGTG GAGCGCCTGG CCGGGCTGGA GCTGCAGCCG 
ATGGGCCAGG AGATGGCCCG TGCCGTGGCG CAGACCAGGC TGGGGGTCTC CACCGAGGAC 
GCGCTGCGTT CGGTGGCCGA CCGGATGAAC TGCCGCGACC TGCACTGGGT GGTGCTGGCC 
ATCCAGATCC AGCGGGAGGT CGGCGGCAAC CTGTCGGAGG TCATCGAGAC CACGGCCGAG 
ACGATGCGCG AGCGGACCCG GCTGCGCCGT CAGATCCGGG CCCTGTCGGC CGAGGGCAGG 
CTCTCGGCCT ATGTGCTCAT CGCCCTGCCG GTCATCACCG GCGGCCTGCT GACGGTGTCA 
CGGCCGGACT ACATGCGGCC GTTGTACACC ACGCCGATGG GCATAGGGAT GATCTGCCTC 
GCGGTGTTCC TGGTGGCGCT CGGCTGGCTG TGGCTGAGCA AGGTCGTCAA GGTGGAGGTC 
TGA 

 

Protein sequence

MVTGRLLAVL CGLALLLPAG TAGAAEPGGR ISALEVMANR VQFLFTAHGL PPKAALDPDS 
VTVTAAGRTL PAKAEPPGSP RPGGPSPGGR NARAVMLVLD TSGSMSAADL AAAKAGAVAF 
LDLLPADVPA GFTTTGTPTR PVIDPTTDRR SLRKALGRMR TGGETALYDA MSAAVDRLAR 
ANAAEGRLVV LSDGKDSAST STLAQVLARL KRTRIAADVV AFKTAATSEG TLRQLAADSG 
GRLLSSPDPR RLNAAFADAA ASFRQSMWIT VTLPQSLQGT ALRLEVRVRA GDTAIKATAS 
AAASPAGTAG PHGRTSASPR HAGTAPADAA GPLAGLPLPA VLGVCFAAIL LLILVVGGLG 
RREPPEWAVR IERYRLRARP SPAEPDAEES RARNPLMRGA LTLSMKITGS GRLAQRLAQD 
LDRAGILLRP HEWTLLRIVI GACLTAVVTP LVGNVLLAAP PVAVITWVAT RAYLRGRAER 
RLTAFADQLP DALQLVAGSL RSGFSVAQSV ERLAGLELQP MGQEMARAVA QTRLGVSTED 
ALRSVADRMN CRDLHWVVLA IQIQREVGGN LSEVIETTAE TMRERTRLRR QIRALSAEGR 
LSAYVLIALP VITGGLLTVS RPDYMRPLYT TPMGIGMICL AVFLVALGWL WLSKVVKVEV