| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_1516 |
|---|
| Symbol | |
|---|
| ID | 8602832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 1734843 |
|---|
| End bp | 1737365 |
|---|
| Gene Length | 2523 bp |
|---|
| Protein Length | 840 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_003299130 |
|---|
| Protein GI | 269125760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00950559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGGG TGGCGCGTCC CGGGCGACGG CCTTCCCCCG TTCCCGACCC CGACAGCCCG
CTGGGAAGGT TCGCCCAAGG GCTGCGCGAG CTGCGGGATC AGGCGGGGGA TCCGAGCTAT
GAGGCGCTGG CCCGGGAGAC CGAACAGCTG GGCTCTCCGT ACTCGGCGAC CTCGCTGCGC
AACGCCGCCT CCGGACGCAC CCGGCCGTCC TGGGACGTCA CCGAGATGTT CGTGCGGGCC
TGCGTCGCCT TCGCCCGCAA ACACCCCCGC CGCGCCGACA GCGCCGCGGG GGAATGGAAG
ACCGACGACC TGCTGGCGAT CTGGACGGCG CGCTGGCAGG CGATCTCACT GTCCGGCGAG
CCGGCCGCCG CCCAGCCGGG CGCCCGCTCC CCCGACCGGT TCGCCGCAGG CGCGCCCGGC
AGGCTGCCGG CGACGCTGAC CAGGTTCGTG GGACGGGAAG CGGAACTGGC CACCGGGCTG
CGGCTGCTGT CGGAAAGCCG CCTGGTGACC TTGACCGGGA TCGGCGGGGT CGGCAAGACC
CGGCTGGCGC TGCACCTGGC CGAGGCCGTC GCCGTGCGCT TTCCCGGCGG CGTCCACCTG
GTGGAGCTGG CGGAGCTGAC CGAACCGACG ATGGTGGACC GCGCCGTGGC CACCGCGCTC
GGCGTCCAGA CCGAGGCCGA GCGGACCCCG CTGGAGGCCA TGGCCGAGGC GCTGCGCGGG
CGGCGGACGC TGCTGGTGCT CGACAACTGC GAGCACCTGC TGGAGGCGAC CGCCGCGCTG
ACGCGCGCCC TGCTGCACGC CGTGCCGCAG CTGCGCGTGC TGGCCACCAG CCGGCAGCCG
CTGAACGAGG CGGGCGAGCA GGTGCTGGCG GTCGATCCGC TGCCGCTGCC GCACCGGGAC
GGCTCGGCGG AGCAGTGCTG CTCGGCGGCG GTGGAACTGT TCGTCGACCG GGCCAAGGCG
GCGGTGCCGG ACTTCCGCCT CACCGACGCC AACCGGGAGG CGGTGGTGCG GGTGTGCCGC
ATGCTGGAGG GCCTGCCGCT GGCGCTGGAG CTGGCCGCGC GCCGGCTGCG CCTGCTGACC
GTCCAGGAGC TGGCCGAACG GCTCGACCAG CGGTTCGCCC TGCTGGGCGC GGCGGGCGCC
GACCGCACCG CGCCGCCGCG GCACCGGACG CTGCGGGCGG TGTTCGACTG GAGCCACGAA
CTGTGCTCGG CCGAGGAACG GGCGGCCTGG GAGCGGCTGT CGGTGTGCGC CGGCACCGTG
TCGCTGGCCG ACGCCGAGGC GCTGTGCGCC GACCAGCGGC CCGCCGCCCA GCCCGCCCTG
GAGGCGATCG CCGGGCTGGT GGACAAGTCG CTGCTGACCC GGATCGAGGT GCGGGGACGG
ACCCGGCTGC GCATGCTGGA GACCGTCCGC ATGTACGGGC GGGAGCACCT GGCCGCCTCC
GGCCGGGACG AGCAGGCCCG GCGCCGGCAC CTGGAGCACT ACCTGGGCCT TGCCCGGCGG
GCCGAGGACG AGTACGCCTC GCCCCGGCAG TGCCGGCGGC TGCTGCGGCT GCGGGAGGAG
CACGCCAACC TGCGGCAGGC GTTCCGCTAC GCGCTGGCCG ACGAGCAGCC CTCCCCGCTG
CTTTTCGAGG GCGCCCGCGC ATTGTGGCTG TACTGGATCG CCTGCGGGAA CGTGGGCGAG
GGCGTGCACT GGATGCGCCG GCTGAGCGAA CGGTTCCCCG AGCCGCCCCG TCCCGACCTG
ACCACCGCCT GGTGCTGGGC GATGTGGGCG GCGGCGTTCG CGTTGCTGCT GCAGGGCGAC
CACGGCGGCT GCGCCGCGTT CTTGGACCGC GTGGAGTCGG TCGCCTCCCG GGCCGGCGAC
GGCGGCGCCG AGTGGGCCGG GCTGCAGGCC GCCGTCCACC AGCAGCGCGG CCTGTCGGCG
CTGTTCCGCG GCGACACCGA GCGGGCCGAG CGGCATTCGC ACGAGGCCCT GCGCTTCGGC
GGGCACCGTC CCGGGCTGCT CACCACCCAG CAGGCGCTGG CCCAGATCGG GCTGTCGGCG
GCGGTGCGGG GAGCCGGGGA GGAGGCGGTG CACTTCATCC GGCGGGCGAT CGAGCTGTCG
GAAGAGTGCG GCGAGACCTG GCACCGCTCC TACCTGCTGT GGACGCTGGC CATCGCCTAT
ACCGAAGAGG GCCGCGCCCG GGAGGCCGTC CCCCTGCTGC GGCAGAGCCT GGACTTCAAG
ATGCAGCTCG GCGACCTGCT GGGCATGGCC ACGGTGAGCG AAACCCTCGC CTGGGTGCTG
GCGCAAAGCG GCGACCCGCA CACCGCGGCT TTGCTGCTGG GGGCGGCCCA CACCACCTGG
CGTCCGGCCG GAGCTCCCCA GCTGTGGGGG TTTTCGCACC TGGTGCGGTA CCGCGACCGC
GGCGTCCAGC AGATCCGGCG GATGCTCGGC GAGGCTTCCT TTGAGAAGTC CTACCGTGCC
GGGGAACGGC TGGGCTTGGA TCAGGCCCTG TCGCAAGCGC TCGGCAAACG GTTCCCCGGC
TGA
|
|---|
| Protein sequence | MGRVARPGRR PSPVPDPDSP LGRFAQGLRE LRDQAGDPSY EALARETEQL GSPYSATSLR
NAASGRTRPS WDVTEMFVRA CVAFARKHPR RADSAAGEWK TDDLLAIWTA RWQAISLSGE
PAAAQPGARS PDRFAAGAPG RLPATLTRFV GREAELATGL RLLSESRLVT LTGIGGVGKT
RLALHLAEAV AVRFPGGVHL VELAELTEPT MVDRAVATAL GVQTEAERTP LEAMAEALRG
RRTLLVLDNC EHLLEATAAL TRALLHAVPQ LRVLATSRQP LNEAGEQVLA VDPLPLPHRD
GSAEQCCSAA VELFVDRAKA AVPDFRLTDA NREAVVRVCR MLEGLPLALE LAARRLRLLT
VQELAERLDQ RFALLGAAGA DRTAPPRHRT LRAVFDWSHE LCSAEERAAW ERLSVCAGTV
SLADAEALCA DQRPAAQPAL EAIAGLVDKS LLTRIEVRGR TRLRMLETVR MYGREHLAAS
GRDEQARRRH LEHYLGLARR AEDEYASPRQ CRRLLRLREE HANLRQAFRY ALADEQPSPL
LFEGARALWL YWIACGNVGE GVHWMRRLSE RFPEPPRPDL TTAWCWAMWA AAFALLLQGD
HGGCAAFLDR VESVASRAGD GGAEWAGLQA AVHQQRGLSA LFRGDTERAE RHSHEALRFG
GHRPGLLTTQ QALAQIGLSA AVRGAGEEAV HFIRRAIELS EECGETWHRS YLLWTLAIAY
TEEGRAREAV PLLRQSLDFK MQLGDLLGMA TVSETLAWVL AQSGDPHTAA LLLGAAHTTW
RPAGAPQLWG FSHLVRYRDR GVQQIRRMLG EASFEKSYRA GERLGLDQAL SQALGKRFPG
|
|---|
| |