| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_1080 |
|---|
| Symbol | |
|---|
| ID | 8602390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 1233406 |
|---|
| End bp | 1235046 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
|---|
| Protein accession | YP_003298704 |
|---|
| Protein GI | 269125334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGT TCTCCTACAC CGACCTGCTG CCGACCGGAC CGGACGAGAC CGAATACCGG
TTGCTGACCA CCGACGGGAT TTCCACCCTC GAGGCGGGGG GCCGCACGTT CCTGCAGGTG
GAGCCGGAGG TGCTGCGGAT GCTCACCGAG ACGGCGATGC GCGACATCGC GCATCTGCTG
CGCCCTTCGC ACCTGCAGCA GCTCCGCAAC ATCCTCGACG ACCCCGAGGC CTCCCCCAAC
GACCGGTTCG TGGCGCTGGA CCTGCTGAAG AACGCCAATA TCGCCGCCGC CGGCGTGCTG
CCCATGTGCC AGGACACCGG TACCGCCATC GTCATGGGCA AGCGCGGCCA GCACGTGCTC
ACCGACGGCC GCGATGAGGA GCACATTTCG CGCGGCGTGT ACGACGCCTA CACCAAGCTC
AATTTGCGTT ACTCCCAGAT GGCCCCGCTG ACCATGTGGG AGGAGAAGAA CACCGGCAAC
AACCTGCCGG CGCAAATCGA GCTGTATGCC ACCGCCGGGG ACTCCTACAA GTTCCTGTTC
ATGGCCAAGG GCGGCGGCAG CGCCAACAAA TCGTTCCTGT ACCAGGAGAC CAAGGCCGTC
TTGAACCCCA AGCGGATGAT GGCCTTCCTG GAGGAGAAGA TCCGTTCCCT GGGCACCGCC
GCCTGCCCGC CCTACCACCT GGCCATCGTG GTGGGCGGCA CCAGCGCCGA GTACGCCCTC
AAGGTCGCCA AGTACGCCTC GGCCCGCTAC CTGGACGGGC TGCCCACCTC CGGGTCGATG
TCCGGGCACG GTTTCCGCGA CCTGGAGATG GAGCGGCAGG TGCTGGAGCT GACCCGGAAC
CTGGGCATCG GCGCCCAGTT CGGCGGCAAG TACTTCTGCC ACGACGTGCG GGTGGTGCGC
CTGCCCCGGC ACGGCGCCTC CTGCCCGGTG GCCATCGCGG TCTCCTGCAG CGCCGACCGG
CAGGCCCTGG CCAAGATCAC GCCGGAGGGC GTCTTCTTGG AGCAGTTGGA GACCGACCCG
GCGCGGTTCC TGCCCGACAC CACCGCCGAG GAGCTGGGCG GCGAGGTCGT CCGCATCGAC
CTGAACCGGC CGATGGACGA GATCCGCGCC GAGCTGAGCA AGTACCCGGT CAAGACCCGG
CTGTCGCTGA CCGGCCCGCT GGTGGTGGCC CGCGACATCG CGCACGCCAA GATCAAGGAG
CGGCTGGACG CCGGCGAGCC GATGCCGCAG TACATGCGCG ACCACGCCGT CTACTACGCC
GGCCCGGCCA AGACCCCCGA GGGGTACGCC AGCGGCTCCT TCGGCCCCAC CACCGCGGGG
CGGATGGACT CCTATGTCGA GCAGTTCCAG GCCGCCGGCG GCTCCTACGT CATGCTGGCC
AAGGGCAACC GCTCCCGGCA GGTCACCGAG GCCTGCAAGA AGTACGGCGG GTTCTACCTG
GGCTCGATCG GCGGCCCGGC GGCCCGCCTG GCCCAGGACT GCATCAAGAA GGTCGAGGTC
CTGGAGTACC CCGAGCTGGG CATGGAGGCG GTCTGGAAGA TCGAGGTGGA GGACTTCCCC
GCCTTCATCG TGGTGGACGA CAAGGGCAAT GACTTCTTCG CCGACACCAC CGGGCCGCTG
CTGACCATCG GACGCCGCTA A
|
|---|
| Protein sequence | MAEFSYTDLL PTGPDETEYR LLTTDGISTL EAGGRTFLQV EPEVLRMLTE TAMRDIAHLL
RPSHLQQLRN ILDDPEASPN DRFVALDLLK NANIAAAGVL PMCQDTGTAI VMGKRGQHVL
TDGRDEEHIS RGVYDAYTKL NLRYSQMAPL TMWEEKNTGN NLPAQIELYA TAGDSYKFLF
MAKGGGSANK SFLYQETKAV LNPKRMMAFL EEKIRSLGTA ACPPYHLAIV VGGTSAEYAL
KVAKYASARY LDGLPTSGSM SGHGFRDLEM ERQVLELTRN LGIGAQFGGK YFCHDVRVVR
LPRHGASCPV AIAVSCSADR QALAKITPEG VFLEQLETDP ARFLPDTTAE ELGGEVVRID
LNRPMDEIRA ELSKYPVKTR LSLTGPLVVA RDIAHAKIKE RLDAGEPMPQ YMRDHAVYYA
GPAKTPEGYA SGSFGPTTAG RMDSYVEQFQ AAGGSYVMLA KGNRSRQVTE ACKKYGGFYL
GSIGGPAARL AQDCIKKVEV LEYPELGMEA VWKIEVEDFP AFIVVDDKGN DFFADTTGPL
LTIGRR
|
|---|
| |