Gene Rmar_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2889 
Symbol 
ID8569555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013502 
Strand
Start bp94611 
End bp95474 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content30% 
IMG OID 
ProductType II site-specific deoxyribonuclease 
Protein accessionYP_003292139 
Protein GI268318421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA AAACAAAAAT AGAGTTAAAA GAGCAATTTT TGAGTCAACT TCAATCGTTC 
GCTGAGGAGT TACATGATTA TGTCTCTACA CAAGATGATC AATGGGTGAT AAAAGGATTT
ATTGATGTTT TCAAAAATAT TTATACTATT ACTAGCGATA CAAAAATAGT TTCTAAGGTT
ATAGAAATTC ATTTATTCCC TAAATTTTTA GAATTCGCTA ATAAGCATGG ATACAAAATG
ATTTTCGCAG ATAAGCAAAA TTGGTATCCT GATATAACAT TCATTTCTAA AAAAGATGAG
CGAATAAAAT TTGCTGTAGA TCTGAAAACA ACATATATCA CAAAATACAA AGATGGAATG
CCTTATGAGT GTAATGGTTT TACTCTTGGC TCTCACGGAA CATATTTCAT TGATAGACAG
AGCACAAAGA ATATACAGTT TCCCTATAGT GAGTATTTGG GACATTATGT ATTAGGAATT
TTATATGAAA GGAATCATGC TACAAAAATT GATGAAACAA AAAAGTATAA ACTTGAAGAG
TTAGAGAACA TACCATCGGT AATTAAAAAT TTTGTATTCT TTGCTCACGA AAAATGGAGA
ATCGCCAGCG ATAAAAGTGG GAGTGGAAAT ACTGCAAATA TTGGTAGTGT CAAAAGAATT
AAAGAATTAT TAGAGGGTAA AGGTATATTT TGGCAATATT TTGGGAAAAA CGGAGAGGAA
TGGTTCGATG AGTACTGGAT GAATTATGGA AGAATCACAA TAAAAGATAA CAAGACAGGT
AAAACCAAGA AGATGACTTC TTTAAAAGAA TTTTTGGTAT TCAAAGGCAT TGAAATTAGT
AAGATAAAGA GGAGAAAGGT ATGA
 
Protein sequence
MDEKTKIELK EQFLSQLQSF AEELHDYVST QDDQWVIKGF IDVFKNIYTI TSDTKIVSKV 
IEIHLFPKFL EFANKHGYKM IFADKQNWYP DITFISKKDE RIKFAVDLKT TYITKYKDGM
PYECNGFTLG SHGTYFIDRQ STKNIQFPYS EYLGHYVLGI LYERNHATKI DETKKYKLEE
LENIPSVIKN FVFFAHEKWR IASDKSGSGN TANIGSVKRI KELLEGKGIF WQYFGKNGEE
WFDEYWMNYG RITIKDNKTG KTKKMTSLKE FLVFKGIEIS KIKRRKV