Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2881 |
Symbol | |
ID | 8569582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013502 |
Strand | + |
Start bp | 88629 |
End bp | 89795 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | transposase, IS605 OrfB family |
Protein accession | YP_003292131 |
Protein GI | 268318413 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGC TCACGGTCAA ATGCAAGCTG GTCCTCTCTA AGGAGCAGCG AGAAGCACTT GACACCACCA TGCGAGCGTT TGCCGCCGCG TGCAACGATG CAATCGCCGT CGGTCGAAGA CTGAATACCG CGTCGAACAT TCGCATCCAC CGCGTCTGCT ACAGCGACCT CAGAGCAAGG CATGGTCTTA CAGCCAACCT TGCCGTCCGT GCCATTGCCC GAGCAGCAGG CATTCTCAAA GTCAAGAAGC GCCAGTGCAG TACAGTACGC CCGACAAGCA TCGACTACGA CGCCCGCATC TTCTCCTTCC GAGAAGCCGA CTGGACGGTC AGCCTCTCCA CAGTACAGGG ACGGATTCGC GTTCCCCTCC ACATAGGAGA CTACCAGAGA ACGCTTCTCG GCAGTAGGAA GCCAACAAGC GCCGTGGTCT GGAAGACGCG GCAAGGAGAC TACTACATCG GTATCCACAT TAACGTAGAG ACGCCCCCAC CTGAAGATGA GCACGGGTGG ATTGGCGTCG ACCTTGGAAT CGTCAACATT GCCACGCTGG ATGACGGCAC GGCGTTCAGC GGCGACCAGA TAGAGCGGGT CCGTGCTCGG TATGAAAGAA CCCGCCGCTC CCTCCAGCGA AAAGGCACGA GGGGCGCAAA GCGCGTCCTG AAACGGCTCT CGGGAAGGGA GCGGCGCTTC CAGCAGGCGA TCAACCACAC CATCAGTCGC CGTATCGTAG ACCGGGCTAT CGCCGAGGGT AAGGGTGTCC GGCTCGAAGA CCTCAGCGGC ATTCGCAAAA GTGTGCGCGT TCGAAAATCG CAGCGCAGAA GAATCCACCG CTGGGCGTTC TATGATTTGC GCATTAAAAT CGCGTACAAG TGCGCCCTTG CCGGGGTGCC CTTCGAGCTG ATTGATCCCC GATATACGTC TCAGCGCTGT CCGGTCTGCG GGCATACCGA GAGGGCAAAC CGCAAGAGCC AGAGCAAGTT TGTCTGCCGC TCGTGCGGAT TGGAAGCGAA CGCCGATGTG GTTGGCGCAA TTAACATTGC ACTCGGGGGT GCCGTCAATC ACCCCGAAGT AGCGCTCGTT GATGTCGAAA CGGTCCTGCA TGGTCAGGAT ACCGGACTGA GACGGAGAGC AGCTACAAGC CCACCCTCTT TAGGGGTGGG TAGTTGA
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Protein sequence | MQTLTVKCKL VLSKEQREAL DTTMRAFAAA CNDAIAVGRR LNTASNIRIH RVCYSDLRAR HGLTANLAVR AIARAAGILK VKKRQCSTVR PTSIDYDARI FSFREADWTV SLSTVQGRIR VPLHIGDYQR TLLGSRKPTS AVVWKTRQGD YYIGIHINVE TPPPEDEHGW IGVDLGIVNI ATLDDGTAFS GDQIERVRAR YERTRRSLQR KGTRGAKRVL KRLSGRERRF QQAINHTISR RIVDRAIAEG KGVRLEDLSG IRKSVRVRKS QRRRIHRWAF YDLRIKIAYK CALAGVPFEL IDPRYTSQRC PVCGHTERAN RKSQSKFVCR SCGLEANADV VGAINIALGG AVNHPEVALV DVETVLHGQD TGLRRRAATS PPSLGVGS
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