Gene Rmar_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2881 
Symbol 
ID8569582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013502 
Strand
Start bp88629 
End bp89795 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content59% 
IMG OID 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003292131 
Protein GI268318413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGC TCACGGTCAA ATGCAAGCTG GTCCTCTCTA AGGAGCAGCG AGAAGCACTT 
GACACCACCA TGCGAGCGTT TGCCGCCGCG TGCAACGATG CAATCGCCGT CGGTCGAAGA
CTGAATACCG CGTCGAACAT TCGCATCCAC CGCGTCTGCT ACAGCGACCT CAGAGCAAGG
CATGGTCTTA CAGCCAACCT TGCCGTCCGT GCCATTGCCC GAGCAGCAGG CATTCTCAAA
GTCAAGAAGC GCCAGTGCAG TACAGTACGC CCGACAAGCA TCGACTACGA CGCCCGCATC
TTCTCCTTCC GAGAAGCCGA CTGGACGGTC AGCCTCTCCA CAGTACAGGG ACGGATTCGC
GTTCCCCTCC ACATAGGAGA CTACCAGAGA ACGCTTCTCG GCAGTAGGAA GCCAACAAGC
GCCGTGGTCT GGAAGACGCG GCAAGGAGAC TACTACATCG GTATCCACAT TAACGTAGAG
ACGCCCCCAC CTGAAGATGA GCACGGGTGG ATTGGCGTCG ACCTTGGAAT CGTCAACATT
GCCACGCTGG ATGACGGCAC GGCGTTCAGC GGCGACCAGA TAGAGCGGGT CCGTGCTCGG
TATGAAAGAA CCCGCCGCTC CCTCCAGCGA AAAGGCACGA GGGGCGCAAA GCGCGTCCTG
AAACGGCTCT CGGGAAGGGA GCGGCGCTTC CAGCAGGCGA TCAACCACAC CATCAGTCGC
CGTATCGTAG ACCGGGCTAT CGCCGAGGGT AAGGGTGTCC GGCTCGAAGA CCTCAGCGGC
ATTCGCAAAA GTGTGCGCGT TCGAAAATCG CAGCGCAGAA GAATCCACCG CTGGGCGTTC
TATGATTTGC GCATTAAAAT CGCGTACAAG TGCGCCCTTG CCGGGGTGCC CTTCGAGCTG
ATTGATCCCC GATATACGTC TCAGCGCTGT CCGGTCTGCG GGCATACCGA GAGGGCAAAC
CGCAAGAGCC AGAGCAAGTT TGTCTGCCGC TCGTGCGGAT TGGAAGCGAA CGCCGATGTG
GTTGGCGCAA TTAACATTGC ACTCGGGGGT GCCGTCAATC ACCCCGAAGT AGCGCTCGTT
GATGTCGAAA CGGTCCTGCA TGGTCAGGAT ACCGGACTGA GACGGAGAGC AGCTACAAGC
CCACCCTCTT TAGGGGTGGG TAGTTGA
 
Protein sequence
MQTLTVKCKL VLSKEQREAL DTTMRAFAAA CNDAIAVGRR LNTASNIRIH RVCYSDLRAR 
HGLTANLAVR AIARAAGILK VKKRQCSTVR PTSIDYDARI FSFREADWTV SLSTVQGRIR
VPLHIGDYQR TLLGSRKPTS AVVWKTRQGD YYIGIHINVE TPPPEDEHGW IGVDLGIVNI
ATLDDGTAFS GDQIERVRAR YERTRRSLQR KGTRGAKRVL KRLSGRERRF QQAINHTISR
RIVDRAIAEG KGVRLEDLSG IRKSVRVRKS QRRRIHRWAF YDLRIKIAYK CALAGVPFEL
IDPRYTSQRC PVCGHTERAN RKSQSKFVCR SCGLEANADV VGAINIALGG AVNHPEVALV
DVETVLHGQD TGLRRRAATS PPSLGVGS