| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2853 |
|---|
| Symbol | |
|---|
| ID | 8569524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013502 |
|---|
| Strand | + |
|---|
| Start bp | 57506 |
|---|
| End bp | 60595 |
|---|
| Gene Length | 3090 bp |
|---|
| Protein Length | 1029 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003292108 |
|---|
| Protein GI | 268318390 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGTA CGTGGAAGGT GTTTTCCCCG GCGTCTGTTG CCCCCGATCG TCTATCCCAA
TCCCCATCGC ACCGGATCTG GCTCCATCAG GACATCCTCG AATTTCTACA CGGCCGGGAC
GCATCTGTGC GTCGGCTGGG CATCATCCTG CGCCAGATTG CGGCCCGTGG ACGCCCCAAT
CGTATTAAAA ACTGCCGCAA CCCTGAAAAT CGTGGCTGGC TGCGCACCCC TATGGGAGGC
GGCGGCAGTG GCATGCATTT CTATCTGTGG TGGGCGCAGA GCGATAGCGA ACGCGTAGCT
CCACTTGCTC CCACCGAAAA CGAAGTCTTT CTTCGCACGA TTCGCCATCA CGATGAGCAC
ACCCCCCTGG ACTGCGGCCA TCGCGACGAC TACATCCACC TTTCGCTTCA GGAACTGCAA
ACAGAACGCA TTGACGGCGT CGACTGCTCA CCCTGGACGC CCGAGCAGCG CGCCTTTATT
GAGGCCGGTG AAGCCGTTCG CATCATTCTG GGCCGGCCCG GTTCTGGCAA AACGGCCAGC
CTCTGGCGCG CCGTAGAGCG ACATCCGGCA CGTCATCTCC TGTATCTGAC CTGGTCGCGG
GAACTGGCCT GGCAGGCGCA TCTCAATTTC TCGGCCCTGA CACCCGACCG AACCATTCGG
TGCTGGCATT TTACCCGCCT CCTTCGCGCT CTTACGCAAC AGGACGAACC TCGCCTTACG
CTGTCGGAAA GCCGCCGGCG TTTTCGCGAA GCGCTCCAGC TGTTGAGTGC CCCTCAACTG
GGCCCCTGGA AGCATCGCCT GACGGCCCTG CATGCAGAAC TGCGCGCCTT CCTGATCGGT
CGGGCACGCC CCGGCCATAC CTCTACCGTC TTCGACGGTA GAGTTTTCCA CCTGCGGCCA
GAAGCCTATG CCGGGCTGCG TCAGAACGAT CGCCATCCCG AGGCCATAGA GAAGGCCTGG
CACGTCTTCG AGCTGCTCGG CCGCGACGAA CGGCTTGCGG AAATCTTTCC CGAACTGGCG
CTTGCCTCGC TGGCGATCCG AACCCTCCAG GCCGGACGTC TACCGGCCGT TCTGGACACG
ATCGAAGGTA TTGTGGTCGA TGAAGTACAG GACCTGACGT TGCTGGAACT GTCGGTCGTG
GTGGAACTCT GGCGCAGGCT GGCGCAGCGG CGCCCGGAGC CCCCGCTTCT GCTGCTGGCA
GGTGACGAAG GACAGACGGT CCGCCCTTCG GGTTTTCGCT GGGGCCCCTA TAAGGACTGG
CTGAGCGAGC GCATTGCGCC GCCTCGGGAC TACGAACTCG GCGAAAGTCT GCGCTGCCCG
GCCAACATCG TGCGCACGTT CGACCGCGCC GCCCGCTACT ACCGCAAACT GCCGCGGGAA
GAACGCCCGG CCCGCCAGCG CCGTGATAGC CCGGCGGCAC CCGGGGGCCA CCTGATCTAC
GTGGCCACCG AAAACCAGCA GCAGGCCGCG TCTCTGATCC ATGAACTGTG TGAAGAAGAA
GCGCTGGTGG TTGTTTCGCT GGAAGATGAG GTCCCCGAGC ACATCTGGTC CCCGGCCCTG
ATCAAAGGGC TCGAGCGTCA GACCGTGGTC GTGCTGAATC CGGGCGCAGT GCTCGAACGG
CTTGATCGAT TCGTTTCAGA GGAGAATTTT GCGTTCGATC GGGAAGACTA TCGCACCGAA
GTCGATCGGC TGCGCGTGGC CCTGAGCCGC TCCAGTGAAA CGCTGGTGTT TCTGGACGTG
GCGCCCACCG CTGCGCAACG CGCCTGTAGT CTGCGTTTGC TGGGAGACGA TGCAGTAGAG
GTGGCACCTC ATGAGCTGCT CAACAGCCTG GAACAGGCCG AGCTCTCTCT GCTGGAGCGC
ATTCAGGCAC GTCTGGAGGA ATTCACGGCG CGAATCGACG AAGACCCCTC ACAGGCCCTT
CAGCTGGCAC TGCGCGCCCG CGAACTCCAG CTGAGAATTC AAAGTCTGGG CGAACATATC
CCCGCACGCA TTGCCCGGGA AGTATCCCGG GCCATTCTCA GCGCGACCGC CCGCCTTCTG
GTCGACGATC ACCCGACCGA GGTGGATGCC CCGGAGCTGC AGCAGGCCAG AGAAGCAGCC
AGAGAACTGG GGCTGGAGCA TTTGAGGGCG CTCGACGAAC TGGTGCGCTG GCATCGGTCC
GGACGCACTT TTCCGGCCGC TCTGCTGCAG GCCGCCTGTC AGCTCCCCGA CGAAGCCGAG
TGGCTGCGAC AGGCCCTTTC GGCCATCGCC TACAGCCTGC ACGCGGCCCT GGAGCACGGC
GCCCGTAGCC CGGAGTCAGC CGCCGTCTTT CTGGAAGACG TGGCAAGCTG GCTTCGCTTC
CTGGACTACG GTGGTAATGT TGAGGAAGCG GTGCGACGCC TGCGGGGTCT TGCGTTCGAC
GCCCTGCTCG CGGCAGGCAA TCTGGCCACC GCAGAGCAAC TGCTTGAACA CATCCATCCG
CCTGACCTAC TCCGCAAAGG ACGTCTGCTG GAAGCAAGGG ACGCGCTCGA GGAGGCCATC
GAAGTCTACC TGCAGGCCGG CGCACACACT GAAGCCGAGC GCGTCCGTCA GCGGCTCTAT
CATTTTCGCA ATCATACCCT GCAGCGCTTT CGTCGTCTGG CCGACCAATG TTCGGATCCT
GAGCAGATCC CTGTGCTGAT TTCCATGCTT TCCGGTGCCC AGCAACGGCT GGCCTTCTGG
TATATTCGAC TCTGTCTGGA GACGAAACAT GGAAGCGACG ACCAGAGCCC ACTGCATCCA
TTCCTCGGCT ACCTCGAAGC GGTGCATGCG CATGCAGAAC TGCTGGAAGA TCCCGAGCTG
ATGATGCTCG GCGCTCTGGA AGAACTGTCG CGCCGGCGGC ACCGGGCCTG TGGCGCAGCG
ACCCGCCTGC TTTTTGAGCG CTTTGGCACC CGCTCGATGG CCCGCCGCCT GCTGGCCTCT
CCCATCGGAG AACTCCCGGA ATGCAGCGAA CCGGCCGTTT TCTGCCTGGC GGCCTCCGTG
CTGGAAACCC TCAGAAACTG TCCGCCCTAC CAGAAACTGT TAGCGTTTAG CGACCATGGA
AAACCGACAC GCGGCCCTGC TGAAAGCTGA
|
|---|
| Protein sequence | MRSTWKVFSP ASVAPDRLSQ SPSHRIWLHQ DILEFLHGRD ASVRRLGIIL RQIAARGRPN
RIKNCRNPEN RGWLRTPMGG GGSGMHFYLW WAQSDSERVA PLAPTENEVF LRTIRHHDEH
TPLDCGHRDD YIHLSLQELQ TERIDGVDCS PWTPEQRAFI EAGEAVRIIL GRPGSGKTAS
LWRAVERHPA RHLLYLTWSR ELAWQAHLNF SALTPDRTIR CWHFTRLLRA LTQQDEPRLT
LSESRRRFRE ALQLLSAPQL GPWKHRLTAL HAELRAFLIG RARPGHTSTV FDGRVFHLRP
EAYAGLRQND RHPEAIEKAW HVFELLGRDE RLAEIFPELA LASLAIRTLQ AGRLPAVLDT
IEGIVVDEVQ DLTLLELSVV VELWRRLAQR RPEPPLLLLA GDEGQTVRPS GFRWGPYKDW
LSERIAPPRD YELGESLRCP ANIVRTFDRA ARYYRKLPRE ERPARQRRDS PAAPGGHLIY
VATENQQQAA SLIHELCEEE ALVVVSLEDE VPEHIWSPAL IKGLERQTVV VLNPGAVLER
LDRFVSEENF AFDREDYRTE VDRLRVALSR SSETLVFLDV APTAAQRACS LRLLGDDAVE
VAPHELLNSL EQAELSLLER IQARLEEFTA RIDEDPSQAL QLALRARELQ LRIQSLGEHI
PARIAREVSR AILSATARLL VDDHPTEVDA PELQQAREAA RELGLEHLRA LDELVRWHRS
GRTFPAALLQ AACQLPDEAE WLRQALSAIA YSLHAALEHG ARSPESAAVF LEDVASWLRF
LDYGGNVEEA VRRLRGLAFD ALLAAGNLAT AEQLLEHIHP PDLLRKGRLL EARDALEEAI
EVYLQAGAHT EAERVRQRLY HFRNHTLQRF RRLADQCSDP EQIPVLISML SGAQQRLAFW
YIRLCLETKH GSDDQSPLHP FLGYLEAVHA HAELLEDPEL MMLGALEELS RRRHRACGAA
TRLLFERFGT RSMARRLLAS PIGELPECSE PAVFCLAASV LETLRNCPPY QKLLAFSDHG
KPTRGPAES
|
|---|
| |