Gene Rmar_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2820 
Symbol 
ID8569491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013502 
Strand
Start bp18385 
End bp21093 
Gene Length2709 bp 
Protein Length902 aa 
Translation table11 
GC content61% 
IMG OID 
ProductFG-GAP repeat protein 
Protein accessionYP_003292075 
Protein GI268318357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.517376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCCG CGTTGATCAT TGCCTGGCCA TTGCAGGCGC AGAAGACGGA TTACGTCTTC 
AACGTACCGG TCAGCGACAA CTTCAAGGAT CCCTATACTG TGGGATTCCA CTCTGGCGCG
CGCGGTGCCT ATGGGCCCTG CGACATGGAT GGCGACGGTC TGGTGGAGGT GCTGGTGACG
GACTATTCGG GCGGCGGCCG CGTCTATGTG ATTGAGAACA AGGGAGTGGA CACCTGGGAG
CTGGTCTATG CTACGCCATG GATGGATTCG ACCAGTACCT CGCAGAATGC TCGGTATGCC
GTCTGTGGTG ATCTGGACGG TGACGGAAAG GGCGAGTTCA TGTTTCTGTC GGGAAGAAGC
TATAGTGCGA CCAACCCGCT GGTGGGTCAG CTTAACCTGC GGCCGGGGCT CTTCGTCTAC
GAGTTCACCG GCACCGATGA CGATTACGGA ACGGGTCCCG CTTCCATCTA TGACTTTCCC
GACGATTTGC CCGATCGTTG GGTCAGCGAG CAGATGGTCG TAGCTGATGT AGATGGCGAT
GGTCAACAGG AGTTGCTTTT CCCAAACAAT GGCAGCAATA ACCGCTACGA CAACTGGTAC
ATTCTATCCG TGACCGGAGA TATTGGGGGC GGGTTTGAGG TGTGGGTCGA GGAAGCGCGC
ATCAGCAGCC GTGCCTCGGA AGACTTTGAC CCGGTCAATC GTGGCGGCGG CAGTCCCTAT
GCGATCCTAC CGGCCGATCT GGATGGTGAC GGGACCTACG AACTGTCCAT GCACTCCTGG
AACAACTTTA ACTTCACCAA TGGAGACGTA CTCGGCCCGG ATCAATATCA GTTTCCTGAT
GCAAACGCGC AGAACGTGTA CGTACATGCC TCCAGCGGAG ACCATGTTGC GCTCTTCGGC
GGCGTCGTGG TAGATATTAA CGGTGACGGA GACGATGAGG TCTTTTATCC TAACTTCTAC
ACCGGGCAAC TGGCCGTCCT GAACTACGAA AGTGGCGAAA ACCCCCTGGA GATCACCACC
GATCAGCTCA TCTTTCCGCT GCTGGAGGGC CCGACGAATC TGGGCATCAC CACCGGCGAC
CTGGACGGTG ATGGCCATCC GGAGTTGATC GGGGCAGGTT ATTCGTATTC CGGAAGCGCC
TTCACGGCAG GCGAACCTTC CTATTTCATC CGTGTGGCGG AATTCACCGG CACCGATCCG
GAAGATCCGT CTTCCTATAC GTTAATGGAC GTCAACACGG CGCTTCCGAT CGACAGCACC
ACGTTCAACG TGATCTTCCG CGACTCGGCC GGGGTGCCGA GCCGTTACTA CGAGCCCAGT
GGAGGGAATG ACCCCTACTT CCCGGCCAAG CTTTCCTACC TTGGCGATCC TGACGGGGAC
GGACAGCGGG AGGTGGTGGT TTCCTTCCAG GGTGTGGATG ACAGCTTGGA TACCTACGAT
GAGGTGTGGA CGGAAGCAGT CGAGGCGCAG CAGTGGTCTT TCACGTCAGA CGCCCGCGAT
GTGGCCTATT CTTCAGGCAA CAACCTGGTG CTTGCGCTGG TGAAGGATGC CGGGGCACCG
ATGCTCCTGG CGCTTGATCC GGACGACGGG AGTGCCGTGG ACACGCTGGA CCTGACCGGC
GTGGCCGGCG GAGACGAGGT GCTCAATGCC CTGGCGGCCA GCGGATCGAC GCTTCTCGGC
GTGAACCTGG TAAGCGATGC CAGCGCCACG GCGATTCGGC TCTACCAGTG GTCCGGAGCC
TTTACCGGAG CACCAGAGGT GGTGCTGGAC ACGATGCTGG CGTCGGGCGG CCGCTTTGGC
AACGCGCTGG GTGCTTACAT CAGCACCGAC TCCATTGCCT TTATCGGTGG GGATACGCAG
ATTTTCCGTA CAGGCACCGA TGGGCAGAAC TTCCTGATCG ATCTGCCTGC GCAGGGAGCG
GCTTCCGGCG GCATTGCGCC GGTCAGCGCC ACGCGTCTCT GGATCAATGG CGCAGGTCAG
CCCGTGCGGT TGATCGACGA CACGGGGCAG GTGCTGGCCA CGATTGATGA CAGCGTTGTG
CCACTGGATG CGGCGGGCGT CGCCTACTAT CGGTTCACCC CCGACTTTGC CGGCTTCTCG
GCGGAATTGC TCGCGATCGG TCCGGACAAC GCCGGCGTGT TTTATCTGGT CGACGTGACC
GACACTCAGA ATCCGCGTCT GGTAGGGACT ACCTCCGGTG GGAGCGGCTC GCTGATCAGC
GGAGTGGGTG GCGGGGTGGC CTTCGACACC CGTCAGCGCC AGATCGTCGG CGTGAACGCG
GGGGCCTCCC TTGTAGCGCA TCCGTTCCAG TACGGATACG TGCGCACGCT TCGGGAGCGC
AGGGCAGCCC CGGCCCGTGC GTTCATGCGG ATCATTGCTT CGGACGGGCT GACGGTGGAT
ATCGACCAGG AACGGGTCAT CCTCCCCTCC GACTACAGGC TTTCGGCCGC CTTCCCCAAC
CCGTTCCGTG AGCGCATGCA GTTTACGGTT ACGTTGCCGC TGGCCAAGCG CATCACCGTG
CGCATCTACG ACATGCTCGG CCGTGAAGTG CGCACGCTGG CCCGCGATGC GCTGTACGGA
CCCGGCACCC ATACCTTCAG CTGGGATGGC ACGGATGCAG CAGGGCAGCG TGTGGCCAGT
GGCCTTTACT TCTACACACT GGAATTCGGC CACTTCCGCA AGGTGGGACA GGTAATGCTG
GTGCGGTAG
 
Protein sequence
MLAALIIAWP LQAQKTDYVF NVPVSDNFKD PYTVGFHSGA RGAYGPCDMD GDGLVEVLVT 
DYSGGGRVYV IENKGVDTWE LVYATPWMDS TSTSQNARYA VCGDLDGDGK GEFMFLSGRS
YSATNPLVGQ LNLRPGLFVY EFTGTDDDYG TGPASIYDFP DDLPDRWVSE QMVVADVDGD
GQQELLFPNN GSNNRYDNWY ILSVTGDIGG GFEVWVEEAR ISSRASEDFD PVNRGGGSPY
AILPADLDGD GTYELSMHSW NNFNFTNGDV LGPDQYQFPD ANAQNVYVHA SSGDHVALFG
GVVVDINGDG DDEVFYPNFY TGQLAVLNYE SGENPLEITT DQLIFPLLEG PTNLGITTGD
LDGDGHPELI GAGYSYSGSA FTAGEPSYFI RVAEFTGTDP EDPSSYTLMD VNTALPIDST
TFNVIFRDSA GVPSRYYEPS GGNDPYFPAK LSYLGDPDGD GQREVVVSFQ GVDDSLDTYD
EVWTEAVEAQ QWSFTSDARD VAYSSGNNLV LALVKDAGAP MLLALDPDDG SAVDTLDLTG
VAGGDEVLNA LAASGSTLLG VNLVSDASAT AIRLYQWSGA FTGAPEVVLD TMLASGGRFG
NALGAYISTD SIAFIGGDTQ IFRTGTDGQN FLIDLPAQGA ASGGIAPVSA TRLWINGAGQ
PVRLIDDTGQ VLATIDDSVV PLDAAGVAYY RFTPDFAGFS AELLAIGPDN AGVFYLVDVT
DTQNPRLVGT TSGGSGSLIS GVGGGVAFDT RQRQIVGVNA GASLVAHPFQ YGYVRTLRER
RAAPARAFMR IIASDGLTVD IDQERVILPS DYRLSAAFPN PFRERMQFTV TLPLAKRITV
RIYDMLGREV RTLARDALYG PGTHTFSWDG TDAAGQRVAS GLYFYTLEFG HFRKVGQVML
VR