Gene Rmar_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2800 
Symbol 
ID8569471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3254786 
End bp3256303 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content66% 
IMG OID 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003292056 
Protein GI268318337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAG AACCGGTTCG CTCGCCCTAC ACCACCGTCA TCGATCTGAC GCGACGGGCT 
CAGCAGAAAA AACAGGAGGC GGCGGCCGTT CAGGCCACCG GCGAGCCGTT GCCGGAAGTA
TCCCTTGCGG AGTTGCCCGA GCGCATGCAG CAGGCCGCCC GGGCGATCGG CTGGACCGAG
CTGATGCCGG TGCAACGCCG CACGTTGCCC TATCTGCTCG AAGGTCGCGA CGTGATCGTC
CAGTCGCAGA CCGGATCGGG CAAGACCGGT GCGTTTCTGT TGCCGCTGTT CGAGCGGCTG
GACCCTTCCC GCGGGCAGGT GCAGGCGCTG ATCCTGACCC CCACGCGTGA GCTGGCCCGG
CAGATCTCTG AGGCGTTCGA GCAGATGAAA ACGGGCGTCT CTGGAGCGCA ATCGCTTCGG
GCCGTGCTCG TCTACGGCGG TGTGCGCTAC GGTCCGCAGC TCAAGGCGCT GGAGCAGGGC
GCCCAGGTGG TGATCGGCAC GCCCGGTCGC ATTCTGGACC TGATCGAACG CGGAGCGCTC
CGGCTGGGCG CGCTCCAGGT GCTCGTCTTC GACGAAGCCG ACGAAATGCT CTCGATGGGC
TTTTACCCGG CCATGCGCCA GCTCAAGCGC TACCTGCCGC GCGAGCGCAA CACGGCCATG
TTCAGTGCCA CGATGCCGCC GCGCGTGCAG GCACTGGCCC GCGAGTTTCT GAAGGACCCG
GCCTTCGTGT CGCTGAGCAC GGATCGAATC GCGGCCGAGA CCATCGAGCA TCGCTACTTC
ATCGTGCCGC CCATGGAGAA AGACCGGGCG CTCGTGCAGC TCATTGAACT GGAAAACCCG
GAGTCGGCCA TCATCTTCGC CAACACGAAG CGCGACGTCG AGTACCTGGG GCAGTTTCTC
AAAAACTACG GCTACAATGC CGACGCGATC ACGGGCGACC TGCCGCAGAA ACAACGGGAG
CGGATTATGG ACCGGCTCCG GAAGGGCCAG CTCCGCCTGC TGGTGGCTAC CGACGTGGCG
GCGCGCGGCA TCGACATCTC GGATCTGAGC CACGTGTTCA TGTACGACGT GCCCCAGGAT
CCCGAGTATT ATGTGCACCG CTCCGGACGC ACCGGGCGCG TGGGGAAGGA AGGCACCACG
ATCGTGCTGG TGACGCCGCT CGAGGAGGCG CGGCTTCGGG CGATTGCCCG CCAGTACGAC
ATTCCGCTCG AAAAGGGCAC GCTGCCCACG CCCGAGACCG TGGCCGAGCG GGTGGCCGAA
CGCGCCGTCG CGCTGCTCGA AGACCGCTAC CGCGAAACGA CCAGTCTGGA CCGGGAGCGG
ATTGCGCGCT TCGTGCCGCT GGTGGAGCAG CTGGCGCAGG AAGAGCCGGA GCTGCTGGCC
ATGCTGGTGG ATGCCCTCTA CGTGCACGAA GGACACCGGA GGGGCATTCG TTCCGAAGCG
GAAGCCGAAG CGCCTTCGCC CGAGCAGAGC GCCCCGCCCG GGAAGAAACG CCGCCGCTCC
CGCCGAAAGA AGTCATGA
 
Protein sequence
MAEEPVRSPY TTVIDLTRRA QQKKQEAAAV QATGEPLPEV SLAELPERMQ QAARAIGWTE 
LMPVQRRTLP YLLEGRDVIV QSQTGSGKTG AFLLPLFERL DPSRGQVQAL ILTPTRELAR
QISEAFEQMK TGVSGAQSLR AVLVYGGVRY GPQLKALEQG AQVVIGTPGR ILDLIERGAL
RLGALQVLVF DEADEMLSMG FYPAMRQLKR YLPRERNTAM FSATMPPRVQ ALAREFLKDP
AFVSLSTDRI AAETIEHRYF IVPPMEKDRA LVQLIELENP ESAIIFANTK RDVEYLGQFL
KNYGYNADAI TGDLPQKQRE RIMDRLRKGQ LRLLVATDVA ARGIDISDLS HVFMYDVPQD
PEYYVHRSGR TGRVGKEGTT IVLVTPLEEA RLRAIARQYD IPLEKGTLPT PETVAERVAE
RAVALLEDRY RETTSLDRER IARFVPLVEQ LAQEEPELLA MLVDALYVHE GHRRGIRSEA
EAEAPSPEQS APPGKKRRRS RRKKS