| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2797 |
|---|
| Symbol | |
|---|
| ID | 8569468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 3250543 |
|---|
| End bp | 3253119 |
|---|
| Gene Length | 2577 bp |
|---|
| Protein Length | 858 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_003292053 |
|---|
| Protein GI | 268318334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGCT TCTGTTATCT GCTGCTGACC GGCCTGCTGC CCGCCCTGGC GCTGGCCCGG
CACCCCGAAC GCCTGACCGT TTACTGGGGC GTGCTGGCCA ACCAGGACAA CGGCCGGGCC
CGCTGGGAAC TGACGCTGGT CAATCAGGAC ACCGTGGCGC TGCCCGCTTC GGGCTGGACG
CTCTACTTCA ACTTCATGCG TCCGATCCTG TCCGAAAGCA CCCCGCCTTC GGTCCGCCTC
ACGCACGTCA ACGGCGACTT CTACCGCCTG GAGCCCACCG AGGCGTTCGC GCCGCTGCCA
CCGGGGGGAC GCCGCACGCT TTCGTTCGAA TCCCCGGGAC CGCTCATCAA GGCTATCGAC
GCGCCCTCGG GCCTCTATTT TGTCTTTCGC GACGCGCCGG ACCGTCCGAT TCCGGTGCGG
GACGTGCGCG TGCTGCCCTT CGCCTCGGAG TTTCAGACGC GGCGGCATCC GGCCGATCGG
CTGCCCGTGC CCACCCCGGC CCTGCGCTAC TACCGGAACG CATCGCTTCG GCTGCTACCG
GCCGATAGCC TGACGCCGGT CGTTCCCACT CCGCGCCAGC TCACGCGCCG AGAAGGACAC
TGGACGCTCG ACCGCACGGC CGCCATCGCC TACGATCCCG CCCTGGCCCG TGAGGCGGCC
TTTCTGGCCG ACGCCCTGGC GCCGCTACTG GGCACGCGGC TTCGCCTGCT GGAAGGTGCC
GAACGGCCCG CTTCGATCCG CCTGCGCCTC GGCGCGGTTT ACCTGCCCGA CGGCCCGGCC
GGCCCCGAGG CCTACCACCT GATCGTGGAC CCGGAAGCGG GCATTACGCT CACCGGCACC
GACGCGGCCG GGGCCTTCTA CGGCATCCAG ACGCTGCAAC AGCTCATCGA TCCGTCCTTC
TATCGACAGA CGTCCGAGAC CATCCCGATC CCGGCGCTCG AAGTGCGCGA TGCGCCGCGC
TTCGGCTACC GGGGACTGCA CCTCGACGTG GCCCGCAACT TCCAGCCGAA AGAAGTGGTG
CTCCGGCTGC TCGACCTGAT GGCGCGCTAC AAGCTCAACC GGTTCCACTT TCACCTGACC
GACGACGAGG GCTGGCGCCT GGAGATCGAG GACCTGCCCG AACTGACCGA GGTGGGCGGC
TGTCGCGGCC ACACCGAAAC GGAAGCAACC TGTCTGGTAC CCTCGCACGG CTCCGGACCG
ATCCCCGGCC GGCCGCCCGG AAGCGGCTAT TACACACGCG AAGACTTTAT CGAAATCCTG
CGCTACGCCA CGGCCCGACA CATCGAGGTG ATCCCCGAGA TCGACGTGCC CGGCCACGCC
CGCGCGGCCA TCAAAGCCAT GGAAGCCCGC TATGCCCGTC TGAAGGCGGC AGGCCGCCCC
GAAGCCGAAG CGGCCGCCTA CCGGCTGGTC GACCCGGCCG ACACGTCCGT CTACCGCTCT
GTGCAGGGCT GGAACGACAA TGTGATCAAC GTCTGCCTGC CCTCGACCTA CCGCTTTCTG
GAAAAGGTGG TGGACGAACT CCGGCGGCTC TACGACGAAG CCGGTGCGCC ACTCCACGTG
GTGCATACGG GCGGCGACGA AGTGCCGCAC GGGGCCTGGG CCGGCTCGCC CGCCTGCCGG
GCCGTCATGC AGGCTGAAGG CATCGACGAT CCGGCCGCGC TGCAGCAGTA CTTCCTGGAC
CGGTTCGATC AGATCCTGCG ACGGCGCGGG CTGCGCACGG CGGGCTGGGA AGAGATCGGG
CTGATCGCCA CCGAGGAAAA CGGACGGCGC GTGCATCGTC CCAATCCACG CTTCCGCGAT
CGGGGCTTCC TGGTCTACGC CTGGAACAAC ATCTGGGGCA GCGGGGCCGA GGATCACGCC
TACCGGCTCG CCAATGCGGG CTACGACGTG ATACTCTCGC TGGCCTCGAA CCTGTACTTC
GACCTGGCCT ACACGAAGCA TCCCGACGAG GCCGGCCTCT ACTGGGCGGG CTTCGTGGAC
AACGACGCGC CGTACCGCCT GGAGCCGTTC GATCTGTTTC TGGGGCCGAT CCAGCACTGG
CTGGGCCACA CGCTCCCGCC CGAAGCGTTC GCCCACCACG AGCGCCTGAC GACCGAGGGA
CGGCGTCACA TCGTGGGCCT GCAGGGACAG CTCTGGGGCG AGACGCTCCG CACACCGGAC
CGCGTCTTCT ACATGGCCGT ACCCCGAATG CTGGCGCTGG CCGAACGCGC CTGGGCCGAG
CGGCCGGCCT GGAGCCAGAT CGTCGATCCG GAAGCCCGCC AGCAGGCCCT GCAGGCGGCC
TGGAACGCGT TTGCTAACCG ACTGGGTCAG CGCGAACTGC CCCGGCTCGA CGCGCTCTAC
GGCGAGACGG CGCCCTATCG CCTGCCGCCG CCCGGTGCCG TCGTCGAGGA CGGCCTTCTG
AAGGCCAACG TGGCGCTCCC GGGTCTGACG ATCCGCTACA CGCTGGACGG CAGCGAGCCC
ACGGCCGCCT CGCCCCGGTA CACGGGGCCG GTCCGGCTCG AAGGGCACGG CGAGGTGCGC
CTGCGCACAT TCGACACGAA CGGACGCGGC AGCCGCACCG TACGCGTGGT CTACTGA
|
|---|
| Protein sequence | MQSFCYLLLT GLLPALALAR HPERLTVYWG VLANQDNGRA RWELTLVNQD TVALPASGWT
LYFNFMRPIL SESTPPSVRL THVNGDFYRL EPTEAFAPLP PGGRRTLSFE SPGPLIKAID
APSGLYFVFR DAPDRPIPVR DVRVLPFASE FQTRRHPADR LPVPTPALRY YRNASLRLLP
ADSLTPVVPT PRQLTRREGH WTLDRTAAIA YDPALAREAA FLADALAPLL GTRLRLLEGA
ERPASIRLRL GAVYLPDGPA GPEAYHLIVD PEAGITLTGT DAAGAFYGIQ TLQQLIDPSF
YRQTSETIPI PALEVRDAPR FGYRGLHLDV ARNFQPKEVV LRLLDLMARY KLNRFHFHLT
DDEGWRLEIE DLPELTEVGG CRGHTETEAT CLVPSHGSGP IPGRPPGSGY YTREDFIEIL
RYATARHIEV IPEIDVPGHA RAAIKAMEAR YARLKAAGRP EAEAAAYRLV DPADTSVYRS
VQGWNDNVIN VCLPSTYRFL EKVVDELRRL YDEAGAPLHV VHTGGDEVPH GAWAGSPACR
AVMQAEGIDD PAALQQYFLD RFDQILRRRG LRTAGWEEIG LIATEENGRR VHRPNPRFRD
RGFLVYAWNN IWGSGAEDHA YRLANAGYDV ILSLASNLYF DLAYTKHPDE AGLYWAGFVD
NDAPYRLEPF DLFLGPIQHW LGHTLPPEAF AHHERLTTEG RRHIVGLQGQ LWGETLRTPD
RVFYMAVPRM LALAERAWAE RPAWSQIVDP EARQQALQAA WNAFANRLGQ RELPRLDALY
GETAPYRLPP PGAVVEDGLL KANVALPGLT IRYTLDGSEP TAASPRYTGP VRLEGHGEVR
LRTFDTNGRG SRTVRVVY
|
|---|
| |