Gene Rmar_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2787 
Symbol 
ID8569458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3236312 
End bp3237313 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content73% 
IMG OID 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_003292044 
Protein GI268318325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGGGCG CAGGCATAGC GCTGCTGCTG GTGCTGGCGC TCGGTTGTCG GCCGGAGCAG 
CCGGCGCCCG CGCCTGATGC GGCCACGACG GCGCTTCTGG CGCAACTCCA ACGGGCCTAT
CGGGCCGGTG AGCGGGCGAC GGCGCTGGCC CTGGCCGACA GTGTGATCCG GCGGGACCCG
GCCCGGCCGG AAGGGTACGT GTGGAAGGCC GCCGTGCTGC GCGAGCTGGG GCAGCTCCGC
GCGGCCGAAT CGGCGCTCCG CGAGGCGTTG CGGCTGCAAC CGAACCACGT CGAAGCCCGC
CTGTTGCTGG CCCGTGTGGT GCAGCAGCAG GGTCGGCTGC AGGAGGCGCT CGGACAGTAC
CGCCAGGCGC TGCGTCGGGC CACGGGAACG CTCCAGGCGG CCGCGTGGCT GCAGCTCGGC
CACGTCTACC GGGAGCTGGG GCGACTCGAC AGCGCGGCCT TTGGCTTTCA GGAGGCGTTG
CGGCGCGACA GCACGCTGGC CGAAGCCTGG GACGGGCTCC GGCAGGTGCG CGAGCTGGAG
GGACGGCTTT CGGAGGCGCT GGCCGCCGCC CGGAGGGCGC AGCAACAGGC GCCCGACGAT
CCCGACTACC GGCTGGCGCT GGGCACGTTG CTGGTGCGGA TGGGACGTTC GGATGAGGCG
ATCACCTGGC TGGAAGGCGT GCTGGCCGCA CGGCCCTGGC ATGCCGTCGC CCATTACCAC
CTGGGGCGGG CCCTGCTGGC CCGGGGCGAT ACGGCCGCCG GACGCCGACA CCTGAGCCGC
GCCGAGCAAC TCCGCCGACT GGAGCCGCTG CTGACGCAGG CCGAAGTGGA AGTCGCCCGA
CATGCCGATG CGCTGGCGTT GCTCAAGCTG GCGCGACGAC TGCTGCAGGA GGGCTATGCC
GAACAGACCC GCCAGGCCGT CGAAGCCGCC CGCGCCCTGC AACCCGAGAG CCCCACGCTG
GAACGACTGC TCCAGGCCAT GAACGAACTG GCCAGTTCCT AA
 
Protein sequence
MWGAGIALLL VLALGCRPEQ PAPAPDAATT ALLAQLQRAY RAGERATALA LADSVIRRDP 
ARPEGYVWKA AVLRELGQLR AAESALREAL RLQPNHVEAR LLLARVVQQQ GRLQEALGQY
RQALRRATGT LQAAAWLQLG HVYRELGRLD SAAFGFQEAL RRDSTLAEAW DGLRQVRELE
GRLSEALAAA RRAQQQAPDD PDYRLALGTL LVRMGRSDEA ITWLEGVLAA RPWHAVAHYH
LGRALLARGD TAAGRRHLSR AEQLRRLEPL LTQAEVEVAR HADALALLKL ARRLLQEGYA
EQTRQAVEAA RALQPESPTL ERLLQAMNEL ASS