Gene Rmar_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2780 
Symbol 
ID8569451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3226689 
End bp3227636 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003292037 
Protein GI268318318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.967057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGA CGCAACTGGC CTATGCGGTG GCCGTCGATA CGTACCGGCA CTTTGGCCGG 
GCGGCCGAAC ACTGCCACGT ATCCCAGCCG ACGCTGAGCA TGCAGCTGCA GAAGCTGGAG
GAAGAGCTGG GCGTGCAGCT TTTCGACCGG AGCCGCAAGC CGATTCTGCC CACGCCCATC
GGGGAACGGA TTCTGGCCCA GGCGCGCGTG ATCCTGCGCG AGTGCGAGCG GCTTTACGAA
CTGCTGAACG AAGACCTGGA GGCCGTCCGG GGCGAGTTGA AGCTGGGCGT GATTCCTACG
CTGTCGCCCT ATCTGCTCCC GCTGGTGACG CGTCCGTTGC AGGAGCGTTA TCCGGAGCTG
ACGGTTCAGG TGGAAGAGCT GACCACCGAG CAGATTCTGG AGGCGCTGGC CACCGACCGG
CTCGACGCCG GGCTGATCGC CACCGAAGAA GGCCGTCCGG GCCTGCGGCG ACGCGCCCTG
TTCCGGGAGC CCTTTGTGGC GTACCTGGGC GCCGACCATC CCCTGCTGGC CGAAACGCAG
CTCGATCCGT CCCGGCTCCG GCTCGAAGAG CTCTGGCTGC TTCGGGAGGG GCACTGCTTC
CGGGATCAGG TGCTTCAGGT ATGCAGTCGC CGTGAGGAGG CGAGTCCGGC CCCCCAGCTA
CGCTTCGAGA GCGGCAATCT GGAAACGCTC CGGCTGCTGG TGGATCGGCT CGGCGGTGTG
ACGCTGCTGC CGTTTCTGGC CACGCACTAC CTGCCGGCCG AAGCGCGCGA GCGCGTGCGG
CACTTCCGCG AGCCGGCACC CCACCGCACG ATCTATCTGA TCTACGCCCG CGCCCACCTG
AAGCGCACGC TGCTGGACGC CTACGTGGCC GTCCTGCAGG AAAGCATCCG GCCGCTCCTG
CCCCAACCGA CTACATCGCT CAGCGCCCTC TCCCCGATAA ATTCGTAG
 
Protein sequence
MTLTQLAYAV AVDTYRHFGR AAEHCHVSQP TLSMQLQKLE EELGVQLFDR SRKPILPTPI 
GERILAQARV ILRECERLYE LLNEDLEAVR GELKLGVIPT LSPYLLPLVT RPLQERYPEL
TVQVEELTTE QILEALATDR LDAGLIATEE GRPGLRRRAL FREPFVAYLG ADHPLLAETQ
LDPSRLRLEE LWLLREGHCF RDQVLQVCSR REEASPAPQL RFESGNLETL RLLVDRLGGV
TLLPFLATHY LPAEARERVR HFREPAPHRT IYLIYARAHL KRTLLDAYVA VLQESIRPLL
PQPTTSLSAL SPINS