Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2780 |
Symbol | |
ID | 8569451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 3226689 |
End bp | 3227636 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003292037 |
Protein GI | 268318318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.967057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGA CGCAACTGGC CTATGCGGTG GCCGTCGATA CGTACCGGCA CTTTGGCCGG GCGGCCGAAC ACTGCCACGT ATCCCAGCCG ACGCTGAGCA TGCAGCTGCA GAAGCTGGAG GAAGAGCTGG GCGTGCAGCT TTTCGACCGG AGCCGCAAGC CGATTCTGCC CACGCCCATC GGGGAACGGA TTCTGGCCCA GGCGCGCGTG ATCCTGCGCG AGTGCGAGCG GCTTTACGAA CTGCTGAACG AAGACCTGGA GGCCGTCCGG GGCGAGTTGA AGCTGGGCGT GATTCCTACG CTGTCGCCCT ATCTGCTCCC GCTGGTGACG CGTCCGTTGC AGGAGCGTTA TCCGGAGCTG ACGGTTCAGG TGGAAGAGCT GACCACCGAG CAGATTCTGG AGGCGCTGGC CACCGACCGG CTCGACGCCG GGCTGATCGC CACCGAAGAA GGCCGTCCGG GCCTGCGGCG ACGCGCCCTG TTCCGGGAGC CCTTTGTGGC GTACCTGGGC GCCGACCATC CCCTGCTGGC CGAAACGCAG CTCGATCCGT CCCGGCTCCG GCTCGAAGAG CTCTGGCTGC TTCGGGAGGG GCACTGCTTC CGGGATCAGG TGCTTCAGGT ATGCAGTCGC CGTGAGGAGG CGAGTCCGGC CCCCCAGCTA CGCTTCGAGA GCGGCAATCT GGAAACGCTC CGGCTGCTGG TGGATCGGCT CGGCGGTGTG ACGCTGCTGC CGTTTCTGGC CACGCACTAC CTGCCGGCCG AAGCGCGCGA GCGCGTGCGG CACTTCCGCG AGCCGGCACC CCACCGCACG ATCTATCTGA TCTACGCCCG CGCCCACCTG AAGCGCACGC TGCTGGACGC CTACGTGGCC GTCCTGCAGG AAAGCATCCG GCCGCTCCTG CCCCAACCGA CTACATCGCT CAGCGCCCTC TCCCCGATAA ATTCGTAG
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Protein sequence | MTLTQLAYAV AVDTYRHFGR AAEHCHVSQP TLSMQLQKLE EELGVQLFDR SRKPILPTPI GERILAQARV ILRECERLYE LLNEDLEAVR GELKLGVIPT LSPYLLPLVT RPLQERYPEL TVQVEELTTE QILEALATDR LDAGLIATEE GRPGLRRRAL FREPFVAYLG ADHPLLAETQ LDPSRLRLEE LWLLREGHCF RDQVLQVCSR REEASPAPQL RFESGNLETL RLLVDRLGGV TLLPFLATHY LPAEARERVR HFREPAPHRT IYLIYARAHL KRTLLDAYVA VLQESIRPLL PQPTTSLSAL SPINS
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