Gene Rmar_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2758 
Symbol 
ID8569427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3196094 
End bp3198667 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003292016 
Protein GI268318297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCG TATCCATCAC CTGCTGGACA CCGACGGCGG AGGCGCCGCT TCCGGCGGAG 
CTGGCCGAGC GACTGCCGCC GGAGGCCCGG CGCTGGATCG AAACGCTGCG CGAAAACCCG
CCCCAGGCGC CGCTGGCCCA TCCGTTCGAC ACGGCCACCG GTCCGCTGCT GCTGCTGGCC
CTTCCCTACC CCTCGGACCC GCCGCTGCTG GTGGTCGCGC TGGACCTGCG CACGATTTTC
CCGGAAACGG ACACATTTTT CCGCACGCTC GTGCAGAGCC TGCGGGCCGT GCTCTGGGAA
GCCGACGCGC GCACGTTCCG CTTCACCTAC GTCAGCCCTC AGGCCGAGGA GCTGCTGGGC
TACCCGGTCC ATCGCTGGCT GGAGGAGCCG GACTTCTGGA CCGCCCACAT CCATCCGGAA
GACCGCGACC GAGCCGTCGC CTACTGCCGC GAAACGACCG ACCGGGGTGA GGACCACGAC
TTCACCTACC GGATGATTTG CGCCGATGGC CGGGTGGTCT GGGTGCGCGA CATCGTCACC
GTGGTGCCGG ACGAACAGGG GCGCCCGCAC CGCCTGCGCG GCCTGCTGCT GGACATCACC
GAGGAGCAGG AAACACGTCG GGAGCTGGAA GTCTTCCGGC AACGCTATCA GGACCTGATC
TCGAATAACC CCATCGCCAC CGGGGTTTAC TGCCGCGGCC AGGTGGTCTA TGCCAACCCG
GCCATGGCCC GGCTTTTCGG CGCAGAGCGG CCCGAAGACC TGCTGGGCAA AACCGCCACC
GACCTGATCC ATCCCAGCAA TCTGGAGGCG GCGCTGGAAA ACGCTCGCAA AGTCGTCGAG
CGGCGCGAAC CCGTTTCCTA CGGCCGCGGC CGCATTCAAC GGCTGGACGG CCGCTCGGCC
ATCGTGGACT TCCGGGGCGT GCCCATCACC TGGGAAGGCG CGCGGGCCGT GCTGTTCTTC
ATGTGGGACG TCAGCGAGCA GCTCCGCACG GCCCGACGCC TGGCCGAACG CGAAGCCCAG
TATCAGGCGC TCTTTGAAAA CGCCCCGGCG CCCATGTACG TGCGGCGCGA CCGCCAATTC
CTGCTGGTCA ACCCGGCCTT CGTCCGCCTG ACGGGCTACA CGGCCGAGGA GCTGACCGCA
CCCGGGTTCG ACGCAATGCG CCTGATTGCG CCCCAGAGCA TCCCCGTCGT TCAGGAACGC
CTGGCCCGGC GGCGACAGGG TCTTCCTGTA CCTCCGCGCT ATGAACTCTG GATCCGACGC
AAAGACGGGA AGGAAATTCT CGTCGAGGCC ATCTCCATCA ACATCCGCTG GGAAGGCGAG
CCGGCCGTGC TGGGCTTCTT CCGGGACCTG AGCGCCCAGC ATGAAGCGGA AACGTACCTG
CAACAGGCCC GCAGACAGGC CGAAGAGGCC AGTCAGCTCA AAAGCCGCTT CCTGGAGCTG
ATGACGCACG AGATCCGCAC GCCGATCAGC ACCATTCTGG GCTATGCAGA TTTGCTCCGG
GACGAACTGG CCGACAGGAT CCCGCCGGAG CTGCTGGAAT TCATCGACGT CATCCGCGAA
AGCGGTCGCC GGCTGCTGGG CACCCTTTCC GACGTGCTGG ACCTGAGCCT GCTCGAAACG
CAACGCCGCC GGCTGGAAAC CGAAGCGGTC AACCTGAACG AGCTGGCGCG CCGACTGGAG
ACCGACTTTG CCCCGATGGC CCGGGCGAAA GGCCTTCGCT GGGAAACGGA AGTGCCCGAG
CAGCCGGTGC GCGTGGTGGC CGACGAAGAG GCATTGCACC GGGCGCTGGC CAACATCGTG
CACAACGCCG TCAAGTTCAC CGAAAGCGGC ACGGTGCAGC TGCGCGTCGG CCAGCACGGC
GGGGAGGGCT GGATCCAGGT ACGCGACACC GGTCCCGGCA TGGATCCGGC GTTCGCCCGC
ACCGGACTGT TCGAGCCATT CCGTCAGGAA TCGGAAGGCA CGAACCGCCA CCATGAAGGG
GCCGGGCTGG GCATGACCGT CGCCCGCCGC TTCGTCGAGG CCATGCGGGG CCGCATTGAA
GTGGACACGG CGCCCGGACG GGGCACCACC GTAACGGTGC ATCTGCCCCT GCTCGAAGCG
CAACCGTCGC CCACGGCCTC GGCGCTGCAT CCGGAAGCCC CCGACCTGCG CCGGCTCCAG
CAGCGCCTTC GGGCGCACCA TCCGCGCATC CTGATCGTCG AAGACAACCC GGAAAATGCC
CGCTTTCTGG AACTGGCGCT GCAGGACGTG GCCGAGGTGA CGGTGGCCGC CGACGCCACA
CGGGCCCTGG AAGCGATCGA CGCCCATCTG CTGGAAAACA GGCGCTTCGA TCTGATTCTG
CTGGACCTGA ATCTGCCCGG CGACTTCAAC GGCCAGGCGC TGCTCCATGA GATCCGCCGG
CGTCCGGCCT ACCACCACGT GCCCGTTGTC GCCCAGACCG CCTATGCCGA GCCCTTCCGG
CCGGAAGACT TCCTGGCCGA AGGGTTCGAC GGCTTTCTGA TCAAACCCAT CGACCGCCTG
ACGCTCTACC GCGAACTGGA CCGCCTGCTG ACCCGGCAAC CGACGCCCTC CTGA
 
Protein sequence
MEAVSITCWT PTAEAPLPAE LAERLPPEAR RWIETLRENP PQAPLAHPFD TATGPLLLLA 
LPYPSDPPLL VVALDLRTIF PETDTFFRTL VQSLRAVLWE ADARTFRFTY VSPQAEELLG
YPVHRWLEEP DFWTAHIHPE DRDRAVAYCR ETTDRGEDHD FTYRMICADG RVVWVRDIVT
VVPDEQGRPH RLRGLLLDIT EEQETRRELE VFRQRYQDLI SNNPIATGVY CRGQVVYANP
AMARLFGAER PEDLLGKTAT DLIHPSNLEA ALENARKVVE RREPVSYGRG RIQRLDGRSA
IVDFRGVPIT WEGARAVLFF MWDVSEQLRT ARRLAEREAQ YQALFENAPA PMYVRRDRQF
LLVNPAFVRL TGYTAEELTA PGFDAMRLIA PQSIPVVQER LARRRQGLPV PPRYELWIRR
KDGKEILVEA ISINIRWEGE PAVLGFFRDL SAQHEAETYL QQARRQAEEA SQLKSRFLEL
MTHEIRTPIS TILGYADLLR DELADRIPPE LLEFIDVIRE SGRRLLGTLS DVLDLSLLET
QRRRLETEAV NLNELARRLE TDFAPMARAK GLRWETEVPE QPVRVVADEE ALHRALANIV
HNAVKFTESG TVQLRVGQHG GEGWIQVRDT GPGMDPAFAR TGLFEPFRQE SEGTNRHHEG
AGLGMTVARR FVEAMRGRIE VDTAPGRGTT VTVHLPLLEA QPSPTASALH PEAPDLRRLQ
QRLRAHHPRI LIVEDNPENA RFLELALQDV AEVTVAADAT RALEAIDAHL LENRRFDLIL
LDLNLPGDFN GQALLHEIRR RPAYHHVPVV AQTAYAEPFR PEDFLAEGFD GFLIKPIDRL
TLYRELDRLL TRQPTPS