Gene Rmar_2675 details

Gene Information

• Locus tag: Rmar_2675
• ID: 8569344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 3100968
• End bp: 3102971
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 71%
• Product: TonB-dependent receptor
• Protein accession: YP_003291935
• Protein GI: 268318216

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACCGGC TGTTCGACCG CGCCGGCCGT AAGGCCGGCC GTTCTGTCGT TCTGGCATGG 
CTGCGCTGGC CCGGACCTCG CATTGAGGTA GCGGGCTTTT TTATGGGCTT TTCTGTCGTT 
CGCTGCGGAC TGGTGTTGCT GGGACTCGGG TGTGTGCTGG GCGCCCGGGC CCAGGAGCGG 
TCCGATACCA CGCTGACGCT CCCGCCGGTC GTCGTCGAAG GGGAGCGCGT CGAGCAGACC 
CGCGAAGCCG GGCGGCGCCT GTGGCGTCTG GAGGCGGTCG AGCTGGAACG CACCGGTGCC 
ACCACGGCGG CCGAGTTGCT GGAAGCGCGA ACCGGGCTCT TCGTCAAACG CTACGGGAGC 
GGCGGGCTGG CCACACTCTC ACTCCGTGGG AGCGGCGCCA CCCAGACGCT TCTGCTCATC 
GACGGGCACC GCGTGGCCGA TCCACAATCG GGTCTGATCG ACCTGACGCT GCTGCCCACC 
GTGCTGCTGT CGTCCATCGA GGTGGTCCAT GGACCGGCCG CCGCCACCTA CGGATCGGGC 
GCCATCGGCG GTGTGGTGCG GCTCTACACG CTGCGGCCGG CGGTGCGCCC GGGCGGCCGG 
GTGGCGTTGC GGCTGGGCGC CTACGGTGAA CGAAGCCTGG GCGTGGTCGC GCATGCCGGG 
GCAGGACGCG TGGCCGTGCT GGGGGCCGTC GAGCACAGCC GCACCATCGG CGACTATCCG 
TATTCCAATC CGCTCCCGCC GCCGGCGGTG CGCCGTCGCG AAGGCGCCGA CCGGTCGATG 
ACCTCGGCGT TCGGCAAGGT GCGCTACGAG GGCACCTGGC GGCTCGAAGG GACGCTGTGG 
CTGACCGAGG CGCGCCGGAG CCTGCCCGGT CCGGGCAACG CGCCACCGGT CGATGCGCAC 
CAGACCGACC GCCAGCGCCG CCTGCTGCTG CTGGCCGAGC GGCCGTTGCC GGCCGGACGG 
TTCACGCTGC GCGGTAGCTA CCAGCACACG CTGCTGGCCT ACGTCAACCG GTTCGCCGGC 
GAGGCCGATA CCACGCGCAC GCGCGGGCTG GCGCTGGAAG CGACGCTCGA CCGGGCGCTG 
CACCCGCACT GGGCCCTGAC CGCCCGGGCC GAAGCCCGGT GGGAGCGGGC GGCGCTGCGC 
GGCGGTGTCG ATCAACGCGC GGTCGCGCTG GCGCTCCACC TGTCCGGGCG CCAGGGACGG 
TTACGCCTCT ACCCGGCGTT GCGGCTGGAT CTGTACGCGA CGGCCGGCCG CACCTTCCAC 
GCACTCAGCC CCCGGCTTGG CCTGAACCTG GCCCTGAAGG AAGGGATGCT GCACCTGAAA 
GGGCTGGTGG GGCGTGCCTT TCGGGCGCCC ACGCTGGGCG AGCGCTTCTT CCGGCCCGGC 
GGCAACCCCG ATCTGAAGCC CGAGCGCGGC TGGACCGTCG AAGCCGGCCT GTATGCTCAG 
CTTCGGCCTT TCGTGCTGGA ACTGACGGCC TTTCAGACCA CGCTGACGGA TCAGATCGTC 
TGGTATCCGG GGTTCGTGGC GCCGGGGTTG CAGCTCTGGC GGCCCATCAA CGTCGGGCGC 
GTGCGCACGC GCGGCCTGGA AGCCTCGCTT CGGGCCGAGG TGCCGCTGGC CGCGTCGCTT 
CGGCTGCAAA GTGGCCTTTT CTACACGTTC ACCCGTGCCG AAGACCGCTC GAATCCGTCC 
ACGCGGGCCT ACGGCCACCA GCTTCGCTAC GTACCGCCGC ACCAGCTCAA GGCTTTTCTG 
GATGTGCTGG CCGGCCCGCT CACGCTGGGA CTCGACGCCC GCCGCACCGG CCGCCGCTAT 
CTCACCACCG ACGAAACCCA GGCGCTGGCG CCCTTCACCG TGCTCGACGC CCATCTGCGC 
CTGACGCAGT CGGTCGCCCG GACCCGGCTG TCCTTCGGCC TGACCGTCGA GAACCTGACC 
GACACGGCCT ACGAGGTCGT GCGCTTCTAT CCGATGCCAC CGCGCCACGT GCGCGTGCAG 
CTTCGCATAG ACCTGCTTCC CTGA 

 

Protein sequence

MHRLFDRAGR KAGRSVVLAW LRWPGPRIEV AGFFMGFSVV RCGLVLLGLG CVLGARAQER 
SDTTLTLPPV VVEGERVEQT REAGRRLWRL EAVELERTGA TTAAELLEAR TGLFVKRYGS 
GGLATLSLRG SGATQTLLLI DGHRVADPQS GLIDLTLLPT VLLSSIEVVH GPAAATYGSG 
AIGGVVRLYT LRPAVRPGGR VALRLGAYGE RSLGVVAHAG AGRVAVLGAV EHSRTIGDYP 
YSNPLPPPAV RRREGADRSM TSAFGKVRYE GTWRLEGTLW LTEARRSLPG PGNAPPVDAH 
QTDRQRRLLL LAERPLPAGR FTLRGSYQHT LLAYVNRFAG EADTTRTRGL ALEATLDRAL 
HPHWALTARA EARWERAALR GGVDQRAVAL ALHLSGRQGR LRLYPALRLD LYATAGRTFH 
ALSPRLGLNL ALKEGMLHLK GLVGRAFRAP TLGERFFRPG GNPDLKPERG WTVEAGLYAQ 
LRPFVLELTA FQTTLTDQIV WYPGFVAPGL QLWRPINVGR VRTRGLEASL RAEVPLAASL 
RLQSGLFYTF TRAEDRSNPS TRAYGHQLRY VPPHQLKAFL DVLAGPLTLG LDARRTGRRY 
LTTDETQALA PFTVLDAHLR LTQSVARTRL SFGLTVENLT DTAYEVVRFY PMPPRHVRVQ 
LRIDLLP