| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2604 |
|---|
| Symbol | |
|---|
| ID | 8569272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 3025314 |
|---|
| End bp | 3026987 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_003291865 |
|---|
| Protein GI | 268318146 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.916004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTAC TGGACTGGTT AATCGTGGCG GCCTATTTCG CGATCCTGGC CGGGATCGTC
TGGTGGTCGG CCCGCCGCGT CAAAACCACC ACGGACTACT TCCTGGCCGG CCGCGACGTG
GGCTTTTTCG TCATCGGTGC CTCGATCTTC GCCTCGAACA TCGGCTCGGA GCACATCGTG
GGGCTGGCCG GAAGCGGCGC GGCCAACGGC CTGGCCCAGG CCCACTGGGA GCTGCACGCC
TGGATTCTGG TGCTTCTGGC CTGGGTGTTC GTGCCGTTTT ACTACCGCTC GGGCGTCTTT
ACGATGCCGG AGTTTCTCGA GCGGCGCTTC AACAGCCGCG CGCGCTGGAT TCTGGCCGTG
GTGTCGCTGA CGGCCTACGT CTTTACGAAG GTGTCGGTGA CGGTATATGC GGGGGCGCTG
GTGTTTCGGA CGCTGCTGGC CGACGTGTTT GGTTCGCCGG ACCAGGCGTT CTGGGTGGGA
GCGATTGCGA CGGTGCTGGC CACGGGGATT TACACGATTC TGGGGGGTCT TCGGGCGGTG
GTTTACACCG AGGTGTTGCA GACGGGGTTG TTGATTCTGG GGAGTGTGTT CATCACGGTA
TTCGGACTTT CGGCGCTGGG GGGCTGGGGT GAGCTGCGGG AGGTAGCGCG CCTGCAGGGC
GAGCAGTGGG CCCTCTGGCG TCCGAACAGT GACCCCAACT TCCCCTGGCT GGGTGTGATG
ATTTCGTCCG CGGTAACGGG CATCTGGTAC TGGTGCACGG ACCAGTACAT TGTGCAGCGG
ACGCTGGCGG CGCGTTCGCT GCAGGATGCG CGACGGGGTG CGCTCTGGGG TGGTTTTCTG
AAGGTGTGGC CGGTGTTCAT TTTTCTGGTG CCGGGGATGA TCGGCTATGC GCTGCACCAG
AAGGGGTTGA TTCACATTCC GACGGACGCT TCGGGCCAGG TGCAGGGGGA CATGGTGTTT
CCGACGCTGG TGGCGGAGCT GTTGCCGCTG GGCCTGCGTG GGCTGGTCGT CGGCGGCCTG
CTTTCGGCAT TGATGTCGTC GCTTTCGTCG CTGTTCAACT CGTGCGCGAC GCTTTTCACG
GTGGACATTT ACGAGAAGCT CCGTCCGGGA CGTCCGGAGT CGGAGCTGGT GCGGGTGGGA
CGGATTGCGA CGGCGGTGGT GGTGGGGCTG GGCTTGCTGT GGATTCCGAT CATGAAGGTG
ATGGCCGAGT CGAAGGCGGG GTTGTACGAC TATTTGCAGA ACGTGCAGGG TTTTCTGGCG
CCGCCGATCA CGGCGGTGTT TCTGCTGGGG ATTACGAGTC GTCGGATCAA CGCGCGGGGT
GCAGTGTGGG GGTTGGGCGT CGGCTTCGTG CTGGCGATGG TGAAGTTGAC GTTGCAATCG
ATGGTGCAGA ACGGGGCGCT GGATCCGAAT ACGTTCCTGG GCGCAATCGG TGCGTTTAAT
GGCTATTACT TCTCCGGACT GCTGTTCTTG CTGAGCGTGC TGATCATCGT CGGCGTATCG
TTGTTAACGG AGCCGCCGCC GGAGGAGAAG GTTCGGGGGT TGACGTTTGG TACGGTGTCG
GCGTCGGATC GGTCTGAGAG TCGGAAGACG TGGGACTGGC GGGATGTGAC GTTGACGGTG
GTGGTTTTGG GGCTGGTGCT GGCGATCTAT CTGTACTTCT CCTTCTGGGT GTAA
|
|---|
| Protein sequence | MTVLDWLIVA AYFAILAGIV WWSARRVKTT TDYFLAGRDV GFFVIGASIF ASNIGSEHIV
GLAGSGAANG LAQAHWELHA WILVLLAWVF VPFYYRSGVF TMPEFLERRF NSRARWILAV
VSLTAYVFTK VSVTVYAGAL VFRTLLADVF GSPDQAFWVG AIATVLATGI YTILGGLRAV
VYTEVLQTGL LILGSVFITV FGLSALGGWG ELREVARLQG EQWALWRPNS DPNFPWLGVM
ISSAVTGIWY WCTDQYIVQR TLAARSLQDA RRGALWGGFL KVWPVFIFLV PGMIGYALHQ
KGLIHIPTDA SGQVQGDMVF PTLVAELLPL GLRGLVVGGL LSALMSSLSS LFNSCATLFT
VDIYEKLRPG RPESELVRVG RIATAVVVGL GLLWIPIMKV MAESKAGLYD YLQNVQGFLA
PPITAVFLLG ITSRRINARG AVWGLGVGFV LAMVKLTLQS MVQNGALDPN TFLGAIGAFN
GYYFSGLLFL LSVLIIVGVS LLTEPPPEEK VRGLTFGTVS ASDRSESRKT WDWRDVTLTV
VVLGLVLAIY LYFSFWV
|
|---|
| |