| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2595 |
|---|
| Symbol | |
|---|
| ID | 8569263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 3013874 |
|---|
| End bp | 3014983 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_003291856 |
|---|
| Protein GI | 268318137 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA TCGACGAATA CCGCGATCGC GAGGCCGCAC TGCGCTACGC CCGGCTGATC
GCGAAGATCA CCACGCGGCC CTGGACGATC ATGGAGGTTT GCGGCGGCCA GACGCACGCC
ATCGTGCGCT TCGGCGTCGA CGAGTTGCTC CCGCCGGGCG TGACGCTCGT GCACGGCCCC
GGCTGTCCGG TCTGCGTAAC GCCTGTCGAA CTGATCGACA AGGCCATCGC CATCGCGTCG
ATGCCCGGCG TGATTTTCTG CTCGTTCGGC GACATGCTCC GCGTGCCGGG TACGCAGGGC
GATCTATTCT CGGTCAAAGC GCGCGGCGGC GACGTCCGGA TCGTCTATTC GCCGCTCGAC
GCCGTGCAAC TGGCCGCCCG CAACCCGGAT CGGGAGGTGG TCTTTTTCGC CGTCGGTTTC
GAGACGACGG CCCCGGCCAA TGCGCTGGCC GTGCTACAGG CCCATCGCAT GGGGCTGAAA
AACTTTTCGA TGCTGGTGGC GCACGTGCTC GTGCCGCCGG CCATGGAGGC CATTCTGCAA
TCTCCGAACA ACCGCGTGCA GGGCTTTCTG GCGGCCGGCC ATGTGTGTAC GGTGATGGGT
TACCGGGAGT ACGAGCCCAT TGCGAAAAAG TACCGGGTGC CGATCGTGGT GACGGGCTTT
GAGCCACTCG ACCTGCTGCA GGGTCTCTAC ATGTGCATCC GACAGCTCGA AGAAGGACGC
TACGAGGTGG AGAACCAGTA CACGCGCTCG GTGCGACGCC AGGGCAACGA AGCGGCTCAG
CAGCATATCC GGGAGGTGTT CGAGATCGTG CCGCGCAAGT GGCGGGGCAT CGGCGAGTTG
CCTCAGAGCG GGCTGGGCCT GCGGGCGCCC TACCAGGCCT ACGACGCCGA GCGCAAGTTC
GGCGTGGTGG CACACACGGC CGAGGAAGCG TCGGAATGCA TTGCCGGCGA GGTGCTGCAG
GGTGCGAAAA AGCCGACCGA GTGCCCGGCC TTCGGGACGC GCTGCACGCC CGAGCATCCG
CTGGGCGCCC CCATGGTGTC GTCCGAGGGT GCCTGCGCCG CCTACTACCG GTATCGTCGG
TTCACCGAAA AACAGACGGC TACGCCATGA
|
|---|
| Protein sequence | MKFIDEYRDR EAALRYARLI AKITTRPWTI MEVCGGQTHA IVRFGVDELL PPGVTLVHGP
GCPVCVTPVE LIDKAIAIAS MPGVIFCSFG DMLRVPGTQG DLFSVKARGG DVRIVYSPLD
AVQLAARNPD REVVFFAVGF ETTAPANALA VLQAHRMGLK NFSMLVAHVL VPPAMEAILQ
SPNNRVQGFL AAGHVCTVMG YREYEPIAKK YRVPIVVTGF EPLDLLQGLY MCIRQLEEGR
YEVENQYTRS VRRQGNEAAQ QHIREVFEIV PRKWRGIGEL PQSGLGLRAP YQAYDAERKF
GVVAHTAEEA SECIAGEVLQ GAKKPTECPA FGTRCTPEHP LGAPMVSSEG ACAAYYRYRR
FTEKQTATP
|
|---|
| |