Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2560 |
Symbol | |
ID | 8569226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2976741 |
End bp | 2979614 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003291824 |
Protein GI | 268318105 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.184362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGCC TGTTTCTCCT GATTCCCGTG CTGCTGACGG CCTGGAGCGT CCGGGCTCAG ACGGGGCGTA TCGCCGGGAC GGTAGTCGAC GCCGAAACGG GCGAGCCGCT CATCGGCGTG AACGTGCTCG TGGTGGAAAA AGCCACCGGC GCCGCCACCG ACCTCGAAGG CCGCTACGAA ATCGCCGACC TCGCTCCCGG CACCTATACG CTGCGCTTCT CTTACGTGGG CTACGTGAGC CAGACCGTGG AAAGCGTCGT GGTGCGGGCG GGCGAGGTCA CGCGCATCGA TCTGAGCCTG GCCCCGGAGT CGGTGGGTCT CGAGGCGGTC GTGGTCGAAG CGCGTCTGCT GCGCAACACC GAAGCGGCGC TGCTGGCCGC CCGTCAGCGG GCCGCCGCCG TCAGCGACGC GATCAGCGCC GAGATGATCG GCCGCACGGG CAGCAGCGAC GCAGCCGACG CCATGGAGAA AGTAACGGGC GCCTCGGTGC TCGACGGCAA GTACGTGTAC GTGCGCGGTC TGGGCGAGCG CTACATGAAC GCCCAGCTCA ACGGACTGGA CCTCCCCAGC GCCGACCCCG ACCGCAAGGC CGTGCCGTTC GATCTGTTTC CCGCCGCCCT GCTCGACAAC ATCGTCACGG TCAAAACCTT CACGCCCGAT CGCCCCGGCA GCTTCACCGG CGGCAGCGTC AACCTGAACA CCCGGGCCTT TCCCGACGCC CTGTCGATCA GCTTTTCCAC TTCGATCACC TACCGGCCGC AGGTGGTGGG CTTCGGCAAT CCCATTCTGG CCGTGCCCGG CGCCGACCCG GGCGTCTGGG GCTTTCGGGC CGGCCGCCTC GACGTGCCCG CCCTGCTACA AACACACCGC TTCGAAAACA TTCCGTCGCT CAGCCAGGCC ATCCTGAACC CCGACAACGC CCGATTGCTG GACCAGCTCT CCCGGGCGCT CACGCCTGAA ATGGCTCCGG TCTACCGACG GGCGCCGCTC AACCAGAGCT ACACGTTTTC GGCAGGCAAT CGCTTCGACC TGGGCGGCGA TCGACTGCTG GGCCTGGTGG CCAGCTTCAG CTATCGACGA CAGGCCACCG CCTACGACGA CGGCATCTGG GCCCGCTACC GGCTGACCGG CCGCGACGAA GCGGTCCTTT CCGAGGATAA CTACCTGCAC ACCATCTCGG GCACCGACGA AGTCGTCTGG GGCAGCCTGA TCAATGCGAC GCTGCGCCCG CATCGGCGGC ACGAGCTGGG CTTCAGCTTC ATTCAGAACC ACAGCGCCGA AAGCACCGCC CGCTACCAGC GTGGTCGTTT TCTGTACAAT CTGGAGCCCG ACGACATCTA CGAAACGCGC GCGCTCATTT ACATCGAACG TGACATCCGC ACCTACCAGG TTCGGGGCAA GCATGCGCTC GGCGACGGAC GCCAGCCCGC CACGCTGAGC TGGGACTTTT CCACGACCGG CACCTGGCAG GACGAACCCG ACCGCCGCTT TTTCACGAAC CATTATCGCC TGCGCACCGG CAGCGACGGC TCCATCGACA CGCTCTACAC GATCCGCGCC ACCACGCCCC CACAGCGCTA CTTCCGCTAT CTGGAAGAAT CGAACCAGGT GGGCAATCTG GCCCTGGAAG TACCACTCAC GACCGCCCTG CGCCTCAAGG TGGGCGGCTA CCTGGAGCGC AAAACACGCA CCTATCGCGA GCGCAAATTT GTGCTGCGCC AGCAGCGGGG CAACCGCTAC GACGGTGACC CCGAGGCTTA CTTCGCGCCC GAAAACCTGG GCATCATTCA GGAACGCGAC CTGAACGGTG ACGGCGCACC CGATCTGTTC ACCTTCGGCC TGTATCTGCA GGAAGACACG CAGCCTTCTT CCAACTACGA CGGTACCCAG GACATCCGGG CCGGCTTTGC CATGATCGAC TGGACGCCGC TGCGCCGGCT GCGGGTGATC ACCGGGCTGC GCTACGAAAC CACCGACATG GAAGTGGTCA GCCAGGACCC CACCAAAGAC GTGGGGCGGC TCCGGAACGG CGACTGGCTT CCGGCGGCTA CGGTCATCTA CCGGCTGGCC GACGACATGA ACCTGCGGCT GGCCTACGGC CGCACGCTGG CCCGACCGGT CTTCCGTGAG CTGGCCCCCT ACTCGACCTT CGAGTACGTG GGCGGCTACC TGCTCACCGG CAACCCCGAC TTGCGCCGCA CGCTCGTGGA CAACTTCGAC CTGCGCTGGG AATGGTTCGT GCGTCCGGGC GAATTGCTCG CCGCCAGCCT GTTTTTCAAG TACTTCGACG ATCCGATCGA AGTCGTCTAC CAGCCCTTCG CGCCCAACGA CAGCCCCGAG GTGCAGTACC GCAATGTCGA AGACGCCACA CTTTACGGGC TGGAGCTGGA GCTGCGCAAG CGGCTGGACT TTCTGAGTGG CGCACTGCGG CATTTTGAAA TCGGCGGCAA CGCGACGTTC ATCCATTCGA CCGTGCGCGT ACCGGCCGAA GAGCTGCAAT CGATCCGGGA GCTACGACCC GACGCACCGG CCACGCGCTC ACTGCAGGGG CAGTCGCCCT ACCTCATCAA CGCCGACCTG AGCTACGTGC ACGAACAGCG CGGCACGACG GTCAGCCTCT ACTACAACGT GTTCGGTCCC CGGCTGAAGG AAGTCGGACT CGGCGGCACG CCCGATACCT ACGAGCGCCC GCGCCACACG CTGGACCTGA ACATGAGCCA GCGGCTGATG ACGAATCTGT CGCTCAAGCT GTCGGCGAAA AACCTGTTGA ACGCCCGCTA CCGCGTTTCC CACAGCTACA GAGGGCGGGA GTACGTGACG CGCGACTACG GCAGCGGGCG ATCGTTCTCC ATCGGGCTCA GCTACCAGTA TTGA
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Protein sequence | MQRLFLLIPV LLTAWSVRAQ TGRIAGTVVD AETGEPLIGV NVLVVEKATG AATDLEGRYE IADLAPGTYT LRFSYVGYVS QTVESVVVRA GEVTRIDLSL APESVGLEAV VVEARLLRNT EAALLAARQR AAAVSDAISA EMIGRTGSSD AADAMEKVTG ASVLDGKYVY VRGLGERYMN AQLNGLDLPS ADPDRKAVPF DLFPAALLDN IVTVKTFTPD RPGSFTGGSV NLNTRAFPDA LSISFSTSIT YRPQVVGFGN PILAVPGADP GVWGFRAGRL DVPALLQTHR FENIPSLSQA ILNPDNARLL DQLSRALTPE MAPVYRRAPL NQSYTFSAGN RFDLGGDRLL GLVASFSYRR QATAYDDGIW ARYRLTGRDE AVLSEDNYLH TISGTDEVVW GSLINATLRP HRRHELGFSF IQNHSAESTA RYQRGRFLYN LEPDDIYETR ALIYIERDIR TYQVRGKHAL GDGRQPATLS WDFSTTGTWQ DEPDRRFFTN HYRLRTGSDG SIDTLYTIRA TTPPQRYFRY LEESNQVGNL ALEVPLTTAL RLKVGGYLER KTRTYRERKF VLRQQRGNRY DGDPEAYFAP ENLGIIQERD LNGDGAPDLF TFGLYLQEDT QPSSNYDGTQ DIRAGFAMID WTPLRRLRVI TGLRYETTDM EVVSQDPTKD VGRLRNGDWL PAATVIYRLA DDMNLRLAYG RTLARPVFRE LAPYSTFEYV GGYLLTGNPD LRRTLVDNFD LRWEWFVRPG ELLAASLFFK YFDDPIEVVY QPFAPNDSPE VQYRNVEDAT LYGLELELRK RLDFLSGALR HFEIGGNATF IHSTVRVPAE ELQSIRELRP DAPATRSLQG QSPYLINADL SYVHEQRGTT VSLYYNVFGP RLKEVGLGGT PDTYERPRHT LDLNMSQRLM TNLSLKLSAK NLLNARYRVS HSYRGREYVT RDYGSGRSFS IGLSYQY
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