| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2472 |
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| Symbol | |
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| ID | 8569138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 2880750 |
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| End bp | 2883764 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003291737 |
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| Protein GI | 268318018 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT GGTGGCTTGC ACTGAGTCTG ACCCTGGGAG CGCTGACGGC CGTTCCGGCT
GCACTGGCGC AGGGTACGGT CTATGGCGTG GTGACCGATT CGCTGACCGG CGAGGCGTTG
CCGGGAGCCA ACGTGTATCT GGTGGGCACG GGCAAAGGGA GTGCGACCGA TCTGGAAGGA
CGCTATCGCA TCACGGGCAT TGCACCCGGC ACCTACACGC TGCGCGTTTC CTATCTGAGC
TATCAGACGC GCGAATTGCC CCTGCGCATT CAGGACGGGG AGACGATCGT GCTGAACATT
GCCCTGGTGC CCGAGTCGAT CGGTGGAGAG GAGATCGTGA TTGTCGGACA GGTCGAAGGC
CAGGTGGCCG CCATCAACCA GCAGCTCAAC GCGAACACGA TCGTCAACGT GGTCTCGGAG
GAAAAAATTC AGGAACTGCC GGACGCCAAC GCGGCGGAAG CGCTTGGGCG GCTGCCCGGG
GTGGCCGTGC AGCGTTCCGG CGGCGAGGCC AACAAGATCG TACTGCGTGG GCTGAGCGAT
CGCTTCACAA CGATTACGGT CGACGGCGTG CGGTTGGCCG CGACCGACGC GGACGCCCGG
GGCCTCGATC TGAGCACGAT CTCGCAGAGT TCGCTGGCCG GCATTGAGCT GTACAAGGCG
TTGACCCCCG ACAAGGACGC CGACGCGATT GCCGGCAGCG TCAACCTGGT CACCAGGAAA
GCGCCCGAGC AGCGGCTCGT TCGCTTCGAT GTGCGGGGCG CTTACAATCA GCTGAACCAG
ACCTGGGGGC AGTACGATCT GAGCGCCCGC TACGGAGAGC GCTTCTGGCG CAAGCGGCTG
GGCGTGCAGC TCATCGGCAG CCTGGAGCGG CGCGATCGGA GTCGCGAGTA CTACGATCTC
GCCTACGATA TGGGGCTGGC CGGCGGCACG GACTACGAAA TCTCCGACAT CGAGCTGAAC
TTCCGCAACG AAATCCGCAC GCGCCAGGGC GTCAGTTTGT TGCTGGACCT GGATACGCCG
GATGGGGGGA CGATTCGTTT CAACAACGTC TTCAACGCCA CCCAGCGCAG CTTCATCGAC
TACTATCGCA ACTATCCCAC CGAAGGCTCC GAGATGTTCT ATGGCGCCCG GGATCGCGAG
CAGAACATCT ACACGTTCAC CAGTGCGCTG CGGGGCGAGC AGTATCTGAA GGGATGGCAG
CTTAACTGGG GGGCTTCCTA TGCCCGGTCG CAATCGCACG ATCCGTTCGA CTTCGATATC
AGCTTTACGG AGCCCTCGGC CACCGATCCC CAGGGCAATC CGATCGCCGG CATGGGTCGC
ATCCCGCCCG AAGAGCTGAA AGGCCCGCCG GAAAGCATTA TTTCCCATGC GTTGAACAAC
TTCGAACGGG CCTACTTCTA CACGGCGTTC TATCGGGAGG AGGAAAATCG CGAAGGGGAG
ACCACGCTGT ACCTGGATCT GGCGCGGGAC TACGCGCTGG GCGGGGGAGT GGCCGGACAG
TTCAAGCTGG GCGGGAAGTT CCGGAGCAAG ACCCGCTTCC GGGAGCGCGG TGAGCTGCTG
GCGCCCTATT ACAACGAAGC GTTTCCGCGC TACGTCCGGA CGGCCGATGG GCAGGTCGTG
CCCAAGGACT TTACAGGCAC CCCCTTCGAG CAGCTTCAGA TGGTGGGCGA CCGGCTGCTG
GTGACGAACT TTCTGGGGGC CAATCCGGAG GACCGCGACC TGTTCGACCG CTTCCGGCTC
TATCCGATGA TCGATCGGGA TCTGCTCCGC ACCTGGTGGG ATCTGAACCG AGACGGTTTT
TCGGATCAGG CCGGGACGAA CCCGGAGTTC GAGCGCAATC TGGAAGCCGA CGCTTATTTC
TATGACCTGA CCGAGCGGGT CTCGGCGGCC TATGTGATGA ACACGTTGCA TTTCGGGCCG
CGCGTTTCGC TCATTGCCGG GGTGCGCGTC GAGCGCGAAA ACAACGACTA CCTCACGCGC
TACACGCCGG ATGATCTGTC CGGCTTCCCG GTACCCAAGG GGGCCTATCG AGACACCAGT
AGCACGTTTT CGGAGACCAT CTGGCTGCCG AACGTTCACC TGACGCTGCG GCCCACCGAT
TTTCTCACGG TGCGGCTGGC CGCCTACAAA GCGCTGGCAC GCCCCAACTA CAACCAGCGC
CTGCCCAGCT TCGTGGCCCG TAAGGCCGGC ACGTTCTATC CCGGCAACTC GCTCTTCGTG
GGCAACCCGG ATCTGAAGGC GGCGCAGGCC TGGAATTACG AGGTGAACGT GGCGCTTTAC
GACGGCCGTT TCGGGTTGTT CTCGGTGTCG GCCTTCTACA AGGACATCAA AAACATGTAC
CACCAGATCA ATGGTGCGTT TTTCGATGCG GCTTCGGCCG ACTCGCTGTT CGACAGGCTG
GGGATCAACG TGACCAGTCC CTTCCAGAAC GAAGGGTTCG CCCTGACCTA TCCGTACAAT
TCCTCGAAGC CGACGCGGGT CTGGGGCGTG GAAATCGAGC ATCAGGCCAA CTTTCTGTTT
CTGCCGGGGG TGCTTCGCAA CCTGGTGCTG ACCTACAATC TGTCGTTCAT CCGATCGGAG
ACCTACATCC CGGGCACGCA AACCGAAGAG TACTGCGAGG AGATTCTACC GGGCATCTGT
GTGCCCAAGT TGCGCTATCA CTTTGTTGAG CGCAAGCACA AGCTGGAGCG CCAGCCGGAC
TTCCTCAGCA ACGTGGCGAT CGGCTACGAC TATCGGGGCT TTTCGGCGCG GCTTTCCATG
TTCCACCAGG GCGAATTCAA CACGCGCTTT TCGCCCAATG GCCGCGACGA CCGGGTGGTC
AAGAGCTTCA CACGCTGGGA CCTGGCGCTT CGCCAGCAGA TTCGTCCCAA CCTGTACGTC
CTGCTCAATG TGAACAACCT GACGAACGTC GAGGAGGGCA CCATTGTGCT GAACCGGGTG
CAGGGCTGGC GGCTGCCCAA CGATCGGGAG ATCTACGGAA CCACCGTGGA CTTCGGCCTG
CGGCTGGTAC TCTGA
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| Protein sequence | MKNWWLALSL TLGALTAVPA ALAQGTVYGV VTDSLTGEAL PGANVYLVGT GKGSATDLEG
RYRITGIAPG TYTLRVSYLS YQTRELPLRI QDGETIVLNI ALVPESIGGE EIVIVGQVEG
QVAAINQQLN ANTIVNVVSE EKIQELPDAN AAEALGRLPG VAVQRSGGEA NKIVLRGLSD
RFTTITVDGV RLAATDADAR GLDLSTISQS SLAGIELYKA LTPDKDADAI AGSVNLVTRK
APEQRLVRFD VRGAYNQLNQ TWGQYDLSAR YGERFWRKRL GVQLIGSLER RDRSREYYDL
AYDMGLAGGT DYEISDIELN FRNEIRTRQG VSLLLDLDTP DGGTIRFNNV FNATQRSFID
YYRNYPTEGS EMFYGARDRE QNIYTFTSAL RGEQYLKGWQ LNWGASYARS QSHDPFDFDI
SFTEPSATDP QGNPIAGMGR IPPEELKGPP ESIISHALNN FERAYFYTAF YREEENREGE
TTLYLDLARD YALGGGVAGQ FKLGGKFRSK TRFRERGELL APYYNEAFPR YVRTADGQVV
PKDFTGTPFE QLQMVGDRLL VTNFLGANPE DRDLFDRFRL YPMIDRDLLR TWWDLNRDGF
SDQAGTNPEF ERNLEADAYF YDLTERVSAA YVMNTLHFGP RVSLIAGVRV ERENNDYLTR
YTPDDLSGFP VPKGAYRDTS STFSETIWLP NVHLTLRPTD FLTVRLAAYK ALARPNYNQR
LPSFVARKAG TFYPGNSLFV GNPDLKAAQA WNYEVNVALY DGRFGLFSVS AFYKDIKNMY
HQINGAFFDA ASADSLFDRL GINVTSPFQN EGFALTYPYN SSKPTRVWGV EIEHQANFLF
LPGVLRNLVL TYNLSFIRSE TYIPGTQTEE YCEEILPGIC VPKLRYHFVE RKHKLERQPD
FLSNVAIGYD YRGFSARLSM FHQGEFNTRF SPNGRDDRVV KSFTRWDLAL RQQIRPNLYV
LLNVNNLTNV EEGTIVLNRV QGWRLPNDRE IYGTTVDFGL RLVL
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