| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2469 |
|---|
| Symbol | |
|---|
| ID | 8569135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2875349 |
|---|
| End bp | 2877589 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Pectinesterase |
|---|
| Protein accession | YP_003291734 |
|---|
| Protein GI | 268318015 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.151342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGGT GCAGGATTCT GCTGCTGGGA CTGCTTCCGC TGCTGGGCGG AGCCGTCGAA
ACGCCCGAAG CGGTGCGCGT TCGCGTGGAG AATCCCTCGG ATGTGGCGCG TCCCGACGAG
CTGGTCGAGC TGGCCTGGGC GCCGCTGGCC GAGCGGCTTC CGGCCCTGAC GCCCGAGCAG
GTGCGCGTGC GTGACGAGGC CAGTGGCCGC TCGGTCCCGC ACCAGGTGGT GGACAACGAC
GGTGACGGGC GGCCGGACGT GCTGCTCTTT CTGGTGAACC TCTGGCCCCG CGAGGCGCGC
ACCTATCGCG TGGAGGCCGC AGCCCCGGAG ACGACCTTTG CCGCCCGGGC TTTCGCCTAT
CACGAGCCGC AACGCGACGA TGTGGCCTGG GAAAGCGATC GGGTGGCGTA TCGCACCTAC
GGCCAGGGCC TCTGGCAGCT GGAGTCGCTC GTGTCGAGCG GCATCGACGT CTGGCTCAAG
CGCGTGCGCG ATCTGGTGAT CACCCGCTGG TACGCGAAGG GGCACGACGC CTATCATATC
GACACGGGCG AAGGCGCCGA CTTTTTCTCC GTCGGCCAGA GTCTGGGCGC CGGCGGCACG
GCCATCTGGC ACGAGGGACG GCTGTTTCCG GCCCGCAACT TCAAGTCGTA CCGCATCCTG
GCCGCCGGTC CGCTCCGGGC CATCGTGGAA CTGCACTACG AACCGTGGGA GGTGGGCGGC
CGCCAGGTGT CGGAAGTGCG GCGCATCACG ATCGACGCCG GACAGTATCT GTTTCGGGAA
GAAGTGACTT TCCGGGCGGC CGATAGCGAG CCGCTGACCT ATGCGATCGG ACTGGTCAAG
CGCGAAGGGG TAACGGGCGC CTGGAAGCAG CGCGACGACT GGACCTGGCT GGGCGTCTGG
GGACCGGTCG AGCGCAAAAA TGGCGGACAC GGCGAGCTGG GCACGGCCGT CCTGATGCCG
GGCGACCGGC TCGAAGCGGT GCGCGAGACC AACGACCACT ACCTGCTGCT TGGCCGCATG
CGTCCGGGCG AACCCGTCGT GCACTATGCC GGGGCAGGAT GGACGGCGGC CGGCGACTTC
CGCCAGGTCG AAGACTGGTG GGCGTATCTG GATCGCTTCG TGCAGCGCTT TCGGGAGCCG
CTTCGGGTGG CGATCCTCAC GCCATCGACC GGCGCCCTGC GCACCGCGCC CGACACGTAC
ACCTACGCCG CCGTGGTCGA TCCGGCTTAC GTCGGCCCCG AAGGAGCGCG CGTGGACGGG
GTGCGGCGCT ACCGGACCAT CGGCCGGGCG CTGGCCGACG TGCCGGCCGA CAACGACGCC
CCCTACGTGA TCTTCGTGCG GCGTGGCCGC TACCATGAGA AGCTTTCCAT CGACCGGCCC
TTCGTCTATC TGATCGGCGA AGATCGGGAG ACGACCGTGC TCTCCTACGA CGACGTGGCG
GGTGGTCCCT GCGCCGACAG CCCGCTGCGG CGGGCGCTGC TGGCACGCTG GCAGGCCGAA
AACCGCTCGG CACAGCCCCG CCAACCCGAC CGTTGCGGTA CGCGGGGCAG CTTCACGCTG
CGCATTGCCG CCCCTGCGGT GCGCGTCGCC CATCTGACCG TGGAAAACGC CTTCGACTAT
CCGGCCTATC AGGACAGCCT GCGCGACCTG CAGGCCGTAG CCGTGCTCAT CGATCGCGAG
GCCGACCGCA CCGTCTTCTA CGACTGCGTG ATTCGCGGCT ATCAGGACAC GCTCTTCGTC
GAGGGCAACC GGAGCTATTT TCGCAACTGT ACGATTCTCG GCCATGTCGA CTTCATTTTC
GGCGGGGGCA CGGCCGTTTT CGAAGCCTGC GATCTGATTT CGCGGGATCG CGGCCGGCCC
AACAACGGCT ACGTGGTGGC ACCCAGCACG CCCCGGAGCC GTCCCTACGG GCTGATTTTC
CATCGGTGTC GCCTGCTGAA GGAATCGCCT GCGATGGCTC CGGCCTCGGT GTGGCTGGGA
CGTCCCTGGC ATCCCTCGAA CCAGCCGGGG CTGGTCAGCA GCAACGCCGT TTTTCTGCAC
TGCTACATGG ACGATCACAT TCGGCCCGAG GGCTGGACGG AGATGCACGG CGTGGATCCG
ATGGGTGAGC GGCTTTTCGA ATACGGCAGC AGCGGGCCGG GAGCCCATCC CGACCGGCCG
CAGCTCACGG CGGCGGAAGC GGCGCTGTAT GCGCCGGCCC ATGTGCTGGC CGGATGGACA
CCCTGGCGAG ACCTCGTCTG A
|
|---|
| Protein sequence | MRWCRILLLG LLPLLGGAVE TPEAVRVRVE NPSDVARPDE LVELAWAPLA ERLPALTPEQ
VRVRDEASGR SVPHQVVDND GDGRPDVLLF LVNLWPREAR TYRVEAAAPE TTFAARAFAY
HEPQRDDVAW ESDRVAYRTY GQGLWQLESL VSSGIDVWLK RVRDLVITRW YAKGHDAYHI
DTGEGADFFS VGQSLGAGGT AIWHEGRLFP ARNFKSYRIL AAGPLRAIVE LHYEPWEVGG
RQVSEVRRIT IDAGQYLFRE EVTFRAADSE PLTYAIGLVK REGVTGAWKQ RDDWTWLGVW
GPVERKNGGH GELGTAVLMP GDRLEAVRET NDHYLLLGRM RPGEPVVHYA GAGWTAAGDF
RQVEDWWAYL DRFVQRFREP LRVAILTPST GALRTAPDTY TYAAVVDPAY VGPEGARVDG
VRRYRTIGRA LADVPADNDA PYVIFVRRGR YHEKLSIDRP FVYLIGEDRE TTVLSYDDVA
GGPCADSPLR RALLARWQAE NRSAQPRQPD RCGTRGSFTL RIAAPAVRVA HLTVENAFDY
PAYQDSLRDL QAVAVLIDRE ADRTVFYDCV IRGYQDTLFV EGNRSYFRNC TILGHVDFIF
GGGTAVFEAC DLISRDRGRP NNGYVVAPST PRSRPYGLIF HRCRLLKESP AMAPASVWLG
RPWHPSNQPG LVSSNAVFLH CYMDDHIRPE GWTEMHGVDP MGERLFEYGS SGPGAHPDRP
QLTAAEAALY APAHVLAGWT PWRDLV
|
|---|
| |