Gene Rmar_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2410 
Symbol 
ID8569075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2796441 
End bp2798327 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content65% 
IMG OID 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003291676 
Protein GI268317957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAG CCGTTGCCCG GCCGTCGTGG CTCCAGCATC TGCCGGTGGC GGCAGCGCTG 
ATAGATGAAA CCCTCCGCTA CCGGGCGGTC AATGCCCGGT GGTGCCGGAC GTTCGCCCTG
GCGGCCGACG AGGTGGTGGG AAGGGCGCAC GCGGAGCTTT TTGAAGAGGA CGGGGGATAC
TGGACGCAGG CACTCCGGCG TGTGCTGCAG GGGGCGGTGG TGGAAGGTGA AGAAATGCTC
CTGAAGCGTC GCGATGGCCC TGCCTTCTGG GTACGCTGGT GGGGGCAGAC CTGCTCGCTG
GGACAACAAC GCGGTGTGAT CCTGGTGTTC GAGGATCAAA CGGAAATGCA TCGGACGCGC
GAAGCACTGG AAGCTTCCCG GCGGCTGCTG ACGCGTGTAC TGTCCTGCTC GCTGGAAGGC
ATCATGGTGC TGCGGCCGGT GTATCAGCCG GACGGAGAGG TGGCCGACTT CGTCTGGCTG
CTGGCCAACC CGCGCGCCCA CGCGCTCCTA CGGCAGTCGG AGCTGGAAGG CCGGCGGCTG
CGCGAAGTGC TCCCCGAGGC AATGCTGCCG GGCTTTTTCG AAGCGTGCGT GCAGGTGGTA
CAACGAGGCG AGCCGCTGCG ACGGACCTTC TGTCTGAAAC AGACCGACCG CTCCCTGTGG
CTTGAAATGG CGGCCACCCG TCTCGATGAA GGGGTGGCCG TCATCTTTCG GGACGTGACC
GAGGCTCGCG AAGCCGAGGC CAAACTGCGC GAGCGCGAAC AACTCTTCCG GCTGCTGGCC
GAAAACATGA CCGATCTGGT GGCGCTGCAC GACGCCGAAG GACGCATCGT GTACGTCAGC
CCCTCGGCCG AACGCATCGT GGGCTACACG CCGGAGGAAC TGATCGGCCA TCGGCTTGAG
GAGTTCTGGC ATCCGGAAGA CCGCAAGCGG TTGCCTACGC TACCGGAACA GGCCGGCGAA
GAAGACCATC CGGGCGTGCT GGTCTATCGT TTCCGGCACA GGCAGGGCGG CTACCGCTGG
CTGGAGACGC ACGTGCGGGC CATCCGCGAC GAAACCGGAC GGCTGGTGCA GCTCCAGACC
AGCTCGCGCG ACGTGACCGA TCGCGTGGAG GCCGAGCAGG CGCTGGCCCG CTCCAACGAA
ACGCTCCAGC AGCGCAATCG CGAACTGCAG GACTTCGCCT ACATCGCCTC GCACGACCTG
CAGGAACCGC TGCGCAAGGT GCGGGCCTTT GCCGAGCTGC TGAAAGAGGA GTACGAATCG
GTGCTGGACG ACGAAGGGCG CTACTACCTG GATCGCATGC AGGACGCCGC TCAGCGTATG
TCCCGGTTGA TCGAAGATCT GCTGACCTTC TCGCGCGTGA CGACGCAGGG CCGGCCGTTC
GAACGCGTCG ATCTGCATGC GATCCTCGAA CAGGTGCTGG CCGATCTGGA GGTGCGCATT
GCCGAAACCG ACGCGCAGGT GCACGTTGAA GGCCACTGGC CCGTCGTGGA AGCCGATCCC
ACGCAGATGC GCCAGCTGCT GCAGAACCTG ATCGGCAATG CATTGAAGTT TCACCATCCC
GAACGCACGC CCGAGGTCTG GCTCCGCGCG CGGCTGGAGG AGACGCCTGC GGGCACGCAA
TGCGTGATCG AGGTGCAGGA CAACGGGATC GGTTTTGACG AGAAGTATCT GGATCGTATC
TTTTCTCCGT TCCAGCGGCT GCACGGCCGG GGCCGCTATG CCGGAACGGG CATGGGGCTG
GCCATCTGTC GCCGGATCGT CGAGCGGCAC CACGGGCAGC TTACCGCCCG GAGTCGCCCC
GACGAGGGAG CCACCTTCAT CGTGCAGCTT CCGCTGATGC AACCGCCGGA TGCTCCGATG
CCGTCATCTT CGACCGCTCA CGCATGA
 
Protein sequence
MEQAVARPSW LQHLPVAAAL IDETLRYRAV NARWCRTFAL AADEVVGRAH AELFEEDGGY 
WTQALRRVLQ GAVVEGEEML LKRRDGPAFW VRWWGQTCSL GQQRGVILVF EDQTEMHRTR
EALEASRRLL TRVLSCSLEG IMVLRPVYQP DGEVADFVWL LANPRAHALL RQSELEGRRL
REVLPEAMLP GFFEACVQVV QRGEPLRRTF CLKQTDRSLW LEMAATRLDE GVAVIFRDVT
EAREAEAKLR EREQLFRLLA ENMTDLVALH DAEGRIVYVS PSAERIVGYT PEELIGHRLE
EFWHPEDRKR LPTLPEQAGE EDHPGVLVYR FRHRQGGYRW LETHVRAIRD ETGRLVQLQT
SSRDVTDRVE AEQALARSNE TLQQRNRELQ DFAYIASHDL QEPLRKVRAF AELLKEEYES
VLDDEGRYYL DRMQDAAQRM SRLIEDLLTF SRVTTQGRPF ERVDLHAILE QVLADLEVRI
AETDAQVHVE GHWPVVEADP TQMRQLLQNL IGNALKFHHP ERTPEVWLRA RLEETPAGTQ
CVIEVQDNGI GFDEKYLDRI FSPFQRLHGR GRYAGTGMGL AICRRIVERH HGQLTARSRP
DEGATFIVQL PLMQPPDAPM PSSSTAHA