Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2404 |
Symbol | |
ID | 8569069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2787154 |
End bp | 2788443 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003291670 |
Protein GI | 268317951 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.398451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAGA TCTGGATCGT TCTGCAGAGC GAATTTCTTC GGCGCGTGCG CACGCGCGCG TTTCTGCTGA CCACGCTGCT GGCGCCGATC CTTCTGCTGG CCATAGCGCT GCTACCCGCC CTGATCGGCT ATCTGGGCGG CCGCGACGCC TCGCGCCACC TGGCCGTGGT CGATTCCACC GGCGTGTTGC TGGCGCGCAT GCAGGAGCGC GCTCCGGCCA CGCTGCACCT GGAAGCCGTG ACGCTGCCGC CCGACTCGCT GCAGGCGGCC GTTCTGCAGG GACGCTACGA CGGGTACCTG ATCCTGCCGG CCGCCCTGGT CGAAGGCGAC GTCGCGGCCG AACTCTACGT CGAGAAAAGC CTCGGGCTGA GCTTTCAGAG CCAGGTCGAG CGTCTGATCA ACCGGGCCGT GCGGGACGTC CGGCTCGAGC GCCTGCAGGT GCCGCCCGAA CTGGTGGCCG CCCTCCGCGC CGAGGTTCCG CTGCGCCAGT ACCGCCTGTC GGAGACCGGC ACCGAAGCCG ACGGCACCGT GTTTTTCTCC ATCATCGGCT ACCTGATGGG CTTCATCATC TACGGCGCCA CGCTGGCCTA CGGGAGCCTG GTCATGCAGG GGGTCATCGA AGAAAAATCC AGCCGCGTGA TCGAGCTGAT CGTCTCCTCG GTCCGGCCGT TTCAACTCCT GATGGGCAAG GTGCTGGGCA TCGGCGCGAT GGGCCTTGTG CAGTTCGTGC TCTGGGGCTT GCTGCTGGTG GCCGGCACCA TGGCGGCCGG CCCCATCATC GCCCATTTTC TCGATCCCCA GCAGCTCAAC CTGCCGGCCA ACGCCTCCAC CCAGGAGCTG CTGCAGGCGG CCAACATCAC GCTGCCGCCC ATCGATCCCC TGCTGATCGT CTGGTTCGTG CTGTTCTTCC TGGGCGGCTA CCTGATGTAC TCCAGCCTGT TTGCGGCCGT TGGCTCGGCC GTCGAGCAGC AGCAGGACGC CCAGAGCCTC ATGCTGCCGC TCATGCTGCT GATCGTGATT CCCATTCTGT TCATTACCTA CGTCATCGAA AACCCCGGCG CCCCGCTGTC GGTCGGGCTG TCGCTGTTCC CGTTCTTTTC GCCGATCCTG ATGATCGTGC GCATTGCCAT CGGCAGTGCG GCGCTGTGGG AGGCCGTGCT GGCCTACCTG CTGCTGGTGG CGGGTTTTCT GGGGGCCATC TGGATCAGCG CCCGCATTTA CCGCATCGGC ATTCTGTCCT ACGGCCAGAA GCCCTCGCTG CGCGAGCTGC TGCGGTGGAT CCGGGCCTGA
|
Protein sequence | MDKIWIVLQS EFLRRVRTRA FLLTTLLAPI LLLAIALLPA LIGYLGGRDA SRHLAVVDST GVLLARMQER APATLHLEAV TLPPDSLQAA VLQGRYDGYL ILPAALVEGD VAAELYVEKS LGLSFQSQVE RLINRAVRDV RLERLQVPPE LVAALRAEVP LRQYRLSETG TEADGTVFFS IIGYLMGFII YGATLAYGSL VMQGVIEEKS SRVIELIVSS VRPFQLLMGK VLGIGAMGLV QFVLWGLLLV AGTMAAGPII AHFLDPQQLN LPANASTQEL LQAANITLPP IDPLLIVWFV LFFLGGYLMY SSLFAAVGSA VEQQQDAQSL MLPLMLLIVI PILFITYVIE NPGAPLSVGL SLFPFFSPIL MIVRIAIGSA ALWEAVLAYL LLVAGFLGAI WISARIYRIG ILSYGQKPSL RELLRWIRA
|
| |