| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2397 |
|---|
| Symbol | |
|---|
| ID | 8569062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2778625 |
|---|
| End bp | 2780853 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003291663 |
|---|
| Protein GI | 268317944 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCGA TGAAATACAT AGCCTGTGGC GTGCTCCTGT GCTATCTGGC GGTGGCTCAG
GTAGCCGCGC AGGAGCGGCA GTGGCAGGTG CACCGCCGCG GTCTATTGCA CCAGACGGTT
TTCAACACGG GTGAGCTGGG CCGGCCGTAC AGTGCGGGCG GGACGGTACC GGAGGGACGT
CCTTCGCTGG AATGGCCTCC GAACTCCCGC CTCATTCTGG AGCGGCGCAA TTATCCCGGC
CACCACAACT CCTTTGGCAG CGGCATCTGG CTGGCGGCCA CGACGCCTTC CGGGCGCCAG
TATGCTTTCT GCGGGGCGGT CTCGAACACC AGCGGCGAGC CGGTGCCGGT CGTCGGGGTT
TACAGCTTTC CGCTGGAAAT CCGGCGCATC GAGAACTATC CCGTGCTGGC TTCGGGCGAG
CTGAACCCCG CCTACAATCC CGACGAGGCC GAAGAGATCA TCATTTCGCG ATGGGATACG
CCCGTGGGCA TCCGGGTCAC GCGGACCAGC CGCGCCTGGA GCTATCCGGG CTATGACAGC
TTCATTATCT ATGAGTATGA ATTTCAAAAT GTTACTCTAG ATACACTGAA AGATGTTTTC
ATCACGTTTG CCGAGACCTT CGGGCCGTCG ATGTTCGGCT GGCAGCGGAA CTTCGGCGTC
TGGTCGGAGG CTTCGCTGCG CGGGCAGCCG CCGGCAGGGA CGGGGGATGT GTTCGCCCGT
TTTGATCTGA AGCGCTGGCT GAGCTATGTC CACACGCGCG ACGGTTTCCC GGAGCCCTTC
TATTTCGAAC AGTGGGCCCA GCCCGGCGAT CGCGGCGGGC TGAATGCTCC GCAGGCCGTC
GGTTTGATGG TGCTCCACTA CGATTACGAG CATCTGGCCA CACGGAATCA GACGCAGCAG
GTTTTCCTGG TGCCGGCCGA CAGTGCGGGC ATGTGGGACG AAAACGGTAA GGCCAAGCAG
CCCTTCATGC TCCGCTACGA GAACGGCAAT CTCTACGAGA CCAAGATCGG TCCCTGGATG
GACCCCCTTC TGCGTCGCAA AACCGCCATC TGGCAGGGCG CAGACGATTC TACGCGGTTT
GCCACGCAGT TCGAGCCGGA TCTCTGGCCT TACTGGAAAG GACGTACAAA GGGCTCCACC
AACCTGTCCT GGTGGCAGCC CGTCGTCCAT GCGCTCGGTT TCTTCCCGTA CATCCTGCCG
CCGGGCGAAA CGATCCGCTT CGCGGTGGCC GAAGTCGTCG GCTACGGGCC GGGACAGAAG
GGCGACAAAA TCTATAAGGA CCTGGGCGGG CGCGTGCGGG CCGGTGCCGA TGCCGGAGAA
TATTTCAGTC CCGTGCCCAG CTGGTACGAA CAACTGGCGT ATCCGCATCT GGGCAGCAAA
GGATTTATCG GCAGCACCTA TCTGTCGGAG CACCCGCTTC CCTGGTACGT GACGCCTCCG
GTGATTTCCA TCCGGGATGT GGCCGATCGC GCCATCGAAC TCTACACGGG CAGGCCGCTG
GCCAAGTACG ATACGCTGCA GTACGATCCG GCCACGGCGC CCCCGCGGGG ACGGTACAAC
ACGATCCCGA TTCCATTCCC GGCCCCGGCC ATCCGGGTGG AAAACACCCA GTCCGGCGCC
AACCGGATCA TCTGGGGGAA TCAGGTGGAG CGCTTCACTT CGCCCAGACT CCGCGCCCCC
TTCAGCCATT ACGAGGTGCT GCGGGCACCG CATCCGCTGG GGCCCTGGAA GGTGATCGAC
GAGGTCGAGC CCGAAGATCC GCGCTACTTC AACCCGGAGA CCGGTGAGTA CGCCATTCTC
GACCCGGACA GCAGGCCGGG TGAAACCGTG GCGTATGCCG TGGTCTCGGT GGATGAAGCC
GGCGGCCGAA GCGGCATGAC CAATCTGACG ATCCATGAAA CCCAGGCACC GGCGGCCCAG
CGGCTGGGCA AGGTGTACGT CATCCCGAAC CCGCTGATTG TCAGCAGCGG GTTGACCGGC
AGCGATCCAC GGGGCGACAT CCTGGACCGC ATTCAGTTCG TGGGTCTGAC GCGGCGGTGC
ACCATCCGGA TCTACTCCTA CACCGGCCAG CTCGTCCGCG TCATCGAGCA CAACCAGGAC
GCCTTCGGCG AGCCGTGGTA TCAGCTGTCG ATCAATAACC AGATCGTCGC CTCCGGGGTG
TACTTCTTCG TGGTAGAAGA TCACGAAACG GGTGAACGGG CTACCGGCAA GTTTGTCGTG
ATTCACTGA
|
|---|
| Protein sequence | MRSMKYIACG VLLCYLAVAQ VAAQERQWQV HRRGLLHQTV FNTGELGRPY SAGGTVPEGR
PSLEWPPNSR LILERRNYPG HHNSFGSGIW LAATTPSGRQ YAFCGAVSNT SGEPVPVVGV
YSFPLEIRRI ENYPVLASGE LNPAYNPDEA EEIIISRWDT PVGIRVTRTS RAWSYPGYDS
FIIYEYEFQN VTLDTLKDVF ITFAETFGPS MFGWQRNFGV WSEASLRGQP PAGTGDVFAR
FDLKRWLSYV HTRDGFPEPF YFEQWAQPGD RGGLNAPQAV GLMVLHYDYE HLATRNQTQQ
VFLVPADSAG MWDENGKAKQ PFMLRYENGN LYETKIGPWM DPLLRRKTAI WQGADDSTRF
ATQFEPDLWP YWKGRTKGST NLSWWQPVVH ALGFFPYILP PGETIRFAVA EVVGYGPGQK
GDKIYKDLGG RVRAGADAGE YFSPVPSWYE QLAYPHLGSK GFIGSTYLSE HPLPWYVTPP
VISIRDVADR AIELYTGRPL AKYDTLQYDP ATAPPRGRYN TIPIPFPAPA IRVENTQSGA
NRIIWGNQVE RFTSPRLRAP FSHYEVLRAP HPLGPWKVID EVEPEDPRYF NPETGEYAIL
DPDSRPGETV AYAVVSVDEA GGRSGMTNLT IHETQAPAAQ RLGKVYVIPN PLIVSSGLTG
SDPRGDILDR IQFVGLTRRC TIRIYSYTGQ LVRVIEHNQD AFGEPWYQLS INNQIVASGV
YFFVVEDHET GERATGKFVV IH
|
|---|
| |