Gene Rmar_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2393 
Symbol 
ID8569058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2771925 
End bp2774480 
Gene Length2556 bp 
Protein Length851 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291659 
Protein GI268317940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.922519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA TGACCATAAA GATCGGCGCC GTCCTGCTTG GCCTCTGCTG GCCGATCCTG 
GCTTTTGCGC AGCAGGCCGG CGACTATCGC TCGGCCGCAG ACGGGAACTG GAGCGCAGCG
GCCACCTGGG AGGTGTTCGA CGGAAACGCC TGGGGAGCGG CTACCAGCGC ACCGACGGGC
ACCGAGCACA TTACGGTGAC GCATACCGTC ACGGTCGACG TGCCGGTAAC GATCTCAGGA
TACCTTAAAG TGGAAGGAAA CGGCGAGGTG ACCATCGGCG ACGGCTCCCT GACCTTCGCC
GATGGGGGCG TCTACGAGCA TGCGCGCGAT GGGGGCAGCG TCCCGCAGGC TACCTGGGAA
GACGGCTCGA CCGTGATGTT CACCGGCATC GTGAGCAATG CCCCGAGCAA TCGCGGACAG
GACTACTATC ACATCGTGCT CAACACGCCC AACCTGTCGT CCAACCGGGA CCTCGGGCTG
CATGGACGGA CGGTTCGGGG CGACATTCAC GTCATCAACA CAGGAAGTGC CCGCTGGCAG
CTGGTGGGCG GCGTGTCCGA TACGATACGG ATCATGGGGG ATGTGATCGT AGAAGCCGGC
CAGTTCGCGA CGCAGGGGAC GGGCAGCGCG ACCAACGTGG TCGTGGAGCA TTACGGCAAC
ATCCGGGTGA CGGGGGGCAA CTTCTCGATC TCCCGGGGTT CGCAGGGTAG TGGTACGGGT
ACGACGACGT GGATTCTGCA CGAGGGGGAT TTTGAGATGT CGAATGCGAC GACGCAGAAT
TCGAATCCGA CGCCCGGGAA TGCGAAGTTC GTGTTTGCGA AGGCGGGGGT GCAGCGTCTG
GTGCTGGGCG AGGGCAACGA CATTCAGGCG TTGCCGATCG AGGTGGCCGA GGGCACGACG
CTCGACATGG GCACCAGCGA ACTGGGCGGC GACGACATCT TCTACCTGAA CGATGGGGCG
ACGCTGGTGA GCGGACACCC GGACGGTCTG GACGGCAATC TGCAGACGAC CGGGGAGGTG
CGTCTGAGCA AGCAGGCCAG CTACGTGTTC AACGGAGCGG CGGCGCAGGT GGTGGGTGGT
CTGCTACCGG ACACGCTGGC GACGCTGGGG ATTGCGAACG CCGAAGGGGT GGCAGTGGCC
GACACGCATC GGGTGTCGAT GCTGGAGGTG GAAGCGGCCG CGGTGCTGGT GATCGACACG
ACGGGCGTGC TGCACGTGGC CGGCGGGCAG GTGCTGGGGA CGGTGGTGAG CCGGGGTGAA
CTGGAGGCCG ACACGGCGCT GACGTTCGGG AACGGGGCCG TCTATGAGCA TGCACGCAAC
GGTGGATCGA TTCCGACGGG CAACTGGGAG GAGGGCTCGA CGGTGCTGTT GACGGGAATT
GTGGACGAGG CGCCGGCCAA CCGGAATCAG AGCTATTACC ACGTGGTGTT CAACACGCCG
AATCAGACGA AGAACCTGCA CATGAGTTTT GACGAGGTGA CGATCGGCGG GGACATCCGG
GTGGTCAGTA CGGGCGTGGC GCGGTGGTAT CTGACGTCGG CTTCGGCGCA GGACACCTCG
GTGGTGACCA TCATGGGGGA TGTGATCGTG GAGGATGGAC AGTTTTCGAC GCACGGGACG
GGTAATGCGA ACACGACGTT TGTCGTGCAC CATTACGGCA ACATCCGGGT GACGGGGGGC
AACTTCTCGA TCTCCCGGGG TTCGCAGGGC GGTGGTACGG GCACGACGAC GTGGATTCTG
CACGAGGGGG ATTTTGAGAT GTCGAATGCG ACGACGCAGA ATTCGAACCC GACGCCCGGG
AATGCGAAGT TCGTGTTTGC GAAGGCGGGG GTGCAGCGTC TGGTGCTGGG CGAGGGCAAC
GACATTCGGC AGTTGCCGAT CGAGGTGGCC GAGGGCACGA CGCTCGACAT GGGCACCAGC
GAGCTGGGCG GCGACGACAT CTTCATTCTC AACGGCGGTG CGACGCTGGC CACGGCCCAT
CCCGGTGGCG TTGCCGGCTC TATCCAGACG CTGGGGACGG TGGCGCTGGA CACCACCGCC
AACTTTGTCT TCAACGGCAG CGAACCGCAG GAGACCAGCA CGCTGATGCC CACGGTGGTC
AACGATCTGG TGATCGACAA TGCGGCGGGC GTGAGGCTTT CGCAGGAGAC CCGGATCAAC
GGCGTGCTCC GGTTGAAGGC GGGGGTGTTT GACAACACGA TTCCGTTCAC GCTGGGTCCC
AACGGGTCGA TTTCCTACGA GGGGGGCAGT CTGCTGCACC CGGTGGCCAA CGAGCCGTCC
CCGGACGTGC CCACGCGGTT CGCCCTGTAT GATGGTTATC CGAATCCGTT CAGACAGGCG
ACCACTATCC GCTACGATGT GGCCGCGCCG CGTCGTGTGG TGATCAAGGT GTACGACCTG
ATGGGCCGCG AGGTGGCCGA GCTGGTCAAC CGGGATCACC AGCCCGGCAC GTACACCGTG
CAGTGGCGTC CGCAGGGCCT GGCCAGCGGC CTCTACTACT GCCGGATCGA CGCCGGGGCG
TTCCAGGCCG TGCGTACGCT GGTGCTGATG AAGTGA
 
Protein sequence
MKTMTIKIGA VLLGLCWPIL AFAQQAGDYR SAADGNWSAA ATWEVFDGNA WGAATSAPTG 
TEHITVTHTV TVDVPVTISG YLKVEGNGEV TIGDGSLTFA DGGVYEHARD GGSVPQATWE
DGSTVMFTGI VSNAPSNRGQ DYYHIVLNTP NLSSNRDLGL HGRTVRGDIH VINTGSARWQ
LVGGVSDTIR IMGDVIVEAG QFATQGTGSA TNVVVEHYGN IRVTGGNFSI SRGSQGSGTG
TTTWILHEGD FEMSNATTQN SNPTPGNAKF VFAKAGVQRL VLGEGNDIQA LPIEVAEGTT
LDMGTSELGG DDIFYLNDGA TLVSGHPDGL DGNLQTTGEV RLSKQASYVF NGAAAQVVGG
LLPDTLATLG IANAEGVAVA DTHRVSMLEV EAAAVLVIDT TGVLHVAGGQ VLGTVVSRGE
LEADTALTFG NGAVYEHARN GGSIPTGNWE EGSTVLLTGI VDEAPANRNQ SYYHVVFNTP
NQTKNLHMSF DEVTIGGDIR VVSTGVARWY LTSASAQDTS VVTIMGDVIV EDGQFSTHGT
GNANTTFVVH HYGNIRVTGG NFSISRGSQG GGTGTTTWIL HEGDFEMSNA TTQNSNPTPG
NAKFVFAKAG VQRLVLGEGN DIRQLPIEVA EGTTLDMGTS ELGGDDIFIL NGGATLATAH
PGGVAGSIQT LGTVALDTTA NFVFNGSEPQ ETSTLMPTVV NDLVIDNAAG VRLSQETRIN
GVLRLKAGVF DNTIPFTLGP NGSISYEGGS LLHPVANEPS PDVPTRFALY DGYPNPFRQA
TTIRYDVAAP RRVVIKVYDL MGREVAELVN RDHQPGTYTV QWRPQGLASG LYYCRIDAGA
FQAVRTLVLM K