Gene Rmar_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2389 
Symbol 
ID8569054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2766008 
End bp2766775 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID 
Product2-deoxy-D-gluconate 3-dehydrogenase 
Protein accessionYP_003291655 
Protein GI268317936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAC TCGAGTTGTT TTCACTGGAA GGCAAAAAGG CGCTGGTGAC CGGGGCCAGT 
CGGGGACTCG GCCGCGCCAT GGCCGAGGCG CTGGCGCGGG CCGGTGCCGA CGTGGTGTGC
GCCAGCAGCC AGCTCAGCGG TACCGACGAG ACGGCCGCCG TCATCCGGGT GCTGGGACGG
CAGGCCTGGC AGGTGGCCGC CGACTTTTCG GATCGGAATG AACTGGAGCG CATGGCCCGG
GAGGCCGAGG AAAAGGCCGG ACAGATCGAC ATCCTGGTGA ACAACGCCGG CACGATCCGG
CGCTACCCGG CGGCCGAATA TCCGCTGGAA GCCTGGGACG AAGTGCTGCG CGTGAACCTG
GACGCCGTGT TTTTCCTGTG CCAGTACTTC GGCCGCAAGA TGATCGCGCG GCGCGCGGGA
AAGGTCATCA ACGTGGCCTC GCTGCTGTCG TTTTCCGGGG GAATTCTGGT GCCCGCCTAC
ACGGCCAGCA AGCACGGGGT GGCCGGGCTC ACAAAAGCGC TCGCCAACGA GTGGGCCCGC
TACAACGTCC AGGTCAATGC CATCGCGCCG GGCTATTTTG CCACCGACAA CACGCGGGCG
CTGCGCGAAG ACCCCGTGCG TTCGCAGGAG ATCCTCTCGC GCATTCCGGC CGGACGCTGG
GGCGAGCCAC CCGATCTGGC CGGCGCCGTG ATCTTTCTGG CCTCGAGCGC CAGCGACTAC
GTGAACGGCC ACATCCTCGT GGTCGATGGT GGCTGGATGG CCCGCTGA
 
Protein sequence
MKGLELFSLE GKKALVTGAS RGLGRAMAEA LARAGADVVC ASSQLSGTDE TAAVIRVLGR 
QAWQVAADFS DRNELERMAR EAEEKAGQID ILVNNAGTIR RYPAAEYPLE AWDEVLRVNL
DAVFFLCQYF GRKMIARRAG KVINVASLLS FSGGILVPAY TASKHGVAGL TKALANEWAR
YNVQVNAIAP GYFATDNTRA LREDPVRSQE ILSRIPAGRW GEPPDLAGAV IFLASSASDY
VNGHILVVDG GWMAR