Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2370 |
Symbol | |
ID | 8569035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2741777 |
End bp | 2745439 |
Gene Length | 3663 bp |
Protein Length | 1220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | 2-oxoglutarate dehydrogenase, E1 subunit |
Protein accession | YP_003291636 |
Protein GI | 268317917 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.604296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACCC TGGGCTTCAA TACCGGATAC GTCGAAGAAC TCTATCGCCA GTATCTGGAA AATCCAGAAA GCGTCAGCGA GAGCTGGCGG GAATTTTTTG CCGACTACAG GCCGGGCGAA TCGTTCGTTG CCGCCCGGGA AACGACCCAG GCGCCGGCCG AGGTGCCCGC GGCGGTGGGG CGTCCGGGGG GTGATGGGGC CGCGCCGGAA GAAGCGGTGA GCGAGTTGGC GCCCGAGGAG GTCGAAGAGC ATCCACTGCG CGGACCGGCC GCCCGGATCG TCGAAAACAT GGAGGCCAGC CTGAAGGTGC CGACGGCCAC CTCGGTACGT ACCATCTCGG TGCGGTTGCT GGCCGAGAAC CGGGCGCTCA TCAATGACTA CCAGCGGCAC GTCGGCGGCG AGAAGGTCTC CTTCACGCAT CTGATCGCCT GGGCGGTGGT GCAGGCGCTC AAGGCGTTCC CCAACATGAA TTCGACCTTC CGGCGGGACG ACGGCACGCC GATCCACGTG CAGCCGAAAA CGATCAACCT GGGGATCGCC ATCGACCTGG AGCGGCGCGG CAAGCGCATG CTGCTGGTGC CCAACATCAA GCACGCCGAT CGCATGAACT TCGCCCAGTT TCTGGGCGCC TATAACGACA TCGTCGCCCG GGCGCGCGAC GGGCGGCTCG ACGTGTCGGA CTTCCAGGGC ACCACGGCGA CCATCACCAA CCCCGGCATG ATCGGGACGG TGATGAGCGT GCCGCGCCTG ATGGCCGGTC AGGGCGTGAT CGTGGGCGTG GGCGCCATCG GCTACCCGCC CGAATATGCC GCGTTGCCGT CGGACATGCT CAGCCGCCTG GGCCTCTCCC AGGTGATGAC GATCACTTCC ACCTACGACC ACCGCGTCAT CCAGGGGGCC GAAAGCGGCG CGTTTCTGGC CTACATCGAC GAGCTGCTGC AGGGCCAGCA CGAATTCTAC GAGCGCGTCT TCGCCGATCT GGGCATTCCC TACCAGCCCT ATCGCCTGGC CAAAGACACG ACGCCGCTGC TGGGCGGGCT CGAAAACGGC GAAGAGCTGA CCATGATTCA GAAGCAGGCG GCCGTGCTGC AGCTCATCCG GGCCTACCGG GTGCGCGGCC ACCTGCAGGC CGACATCAAC CCGCTCGGCT ACGAGTGGAA GTACCATCCC GAGCTGGATC CGGCCACCTA CGGCCTGACC ATCTGGGACC TGGACCGCCA GTTCGTCACC GGCGGGCTGG GCGGCAAAGA TGTGGCGCCG CTGCGCGAGA TCCTGGACAT CCTGCGCCAG ACCTACACGC GCAAGATCGG GATCGAGTAC ATGCACATCT CGGATCCGAC CGAGCGGCGC TGGCTCCAGG AACGCATCGA GCCGGTGCGG GCGGCCGATC CGATCTCGCC CGACATGCGG CGGCGCATCC TGCAGAAGCT CAACGCGGCC GAGGCGTTCG AGCGCTTCCT GCACACGAAA TACATCGGCC ACAAGCGCTT CTCGCTGGAA GGCGCCGAGT CGCTCATTCC GATCCTTGAC ACGATTCTTT CCGACGCGGC CGACCAGGAA GTCGAGGAGG TGGTCATCGG GATGGCCCAT CGCGGCCGCC TGAACGTGCT GGCCAACATC CTGGGCAAGC CCTACGAGGT GATCTTCTCC GAGTTCGAGG GCAACATCGA CCCGAACACC ACCCAGGGCT CGGGCGACGT GAAGTATCAC CTGGGCGCTA AAGGCGTGCA CCGCTCGCCC AGCGGCAACG AGGTCAAGAT TACGCTGGCG TCCAATCCGA GCCACCTGGA GGCGGTCGAT CCGGTCGTCG AGGGCATGGT GCGCGCCAAG CAGGACCAGC TCCGGCGGCA GCGGGCCGAG GCGCCGGGTG GCGACTACTA CGATGCGGTC ATCCCCATCC TGATTCACGG CGACGCCGCC TTTGCCGGGC AGGGTGTGGT GGCCGAAACG CTCAACCTGA GCCAGCTCCG GGGCTACAAG ACGGGCGGCA CCATCCACAT TGTCGTCAAC AACCAGATCG GATTCACGAC GGCGCCGGCC GACGCCCGCA GCTCCACCTA CGCCACGGAC ATCGCCCGAA TGATTCAGGC GCCGATCTTC CACGTCAACG GCGACGACCC GGAGGCCTGC GTGCGCGTGG CCCGGCTGGC GCTTGACTAC CGGCAGGTGT TCAACAAGGA CGTGGTGATC GACCTGGTCT GCTACCGCGT CCACGGCCAC AACGAGGCCG ACGAACCTAC CTACACGCAG CCGCTGCTCT ACAAGAAGAT CGCGCAGAAG CGCTCGGTCC GGAAGCTCTA CACCGAGATG CTGCTGCGCC GGGGCGATAT GACGCCCGAA GAGGCCGAGC GGATGCTCGA CGACTATCAG GCACGGCTGC AGGAAGCCTT CGAGCGCACG AAGAACCTGA AGGAGCGCGA TCCCCGCGAG GTGGTCGAAC AGCTTCGCAA AAAGGCCGAA GACGACGCTC CGCTGCCCGA GGTGGAGACG GCCGCCCGCA GGGAAGACCT GGAGGCCGTC GTGCAGGCGC TGGTCAACCT GCCCGATGGC TTCCACGTGC ATCCGAAGCT GGAACGCCAG TTCAAGCGGC GTGAAAGTCT TTTCTTCAAG GAAAAGAAGA TCGACTGGGC GTTTGCCGAA GCGCTGGCCT TCGGTACGCT GCTGCTCGAA GGCTCGCCCG TGCGCCTGAG CGGCCAGGAC TCGCGGCGTG GCACCTTCAG CCAGCGCCAT GCCGTGCTCT ACGACCAGGA GACCGGCGAG GAATACATCC CGCTCAACCA CATCCGCGAG GGACAGGCCG AGCTGCTCAT CTACGACAGC CTGCTTTCGG AATATGCCGT GTGCGGGTTC GAGTACGGCT ACTCGGTGGC CTCCCCCGAG ACGCTCGTGC TCTGGGAGGC GCAGTTCGGC GACTTCGCCA ACGGCGCGCA GATCGTCTTC GATCAGTTCA TCTCGGCCGC CGAGGAGAAG TGGGGCCAGC AGTCCGGTCT GGTCTGCCTG CTGCCGCACG GCTACGAAGG GCAGGGGCCC GAGCACTCGT CGGCGCGCCT GGAGCGCTTC CTGCAGCTCT GCGCCCAGCA GAACATGATC GTGGGCAACC TGACCACGCC GGCCAACTAC TTCCACGTGC TGCGGCGACA GGCCCGGATG CCCGTCAAGA AGCCGCTCGT TCTCATGACG CCCAAGAGCC TGCTGCGGCA TCCGCTGGCC GTCTCGACGC CCGAAGAACT CTGGAGCGGC CGTTTCCGTG AAGTCTATCC GGCCGAGACC GATCCGGCCG AAACGCGCCG GCTCATCTTC TGCAGCGGCA AGATCTACTA CGATCTGCTG GAGGTGCTGC TGCAGGATGA GAACCTGCGC CGACAGATCG GTCTGGTGCG CGTCGAGCAG TTCTATCCGT TCCCGAAAGC GGCCATCCAG GCCGAGCTGG AGCGCTATCG CAACGTGACC GACGTGGTCT GGGTGCAGGA AGAGCCGGCC AACATGGGCG CCTGGTTCTA CATGCAGCCG CGGCTGAATG CGATGCTCGA GGCGCTCCAC GGCGACTGCA ACCGGCGCGT GCGCTACGTG GGACGCCCGG CCAGCGCCAG TCCGGCCACC GGCAGCGCTA AAGTGCACCA GGTCGAACAG GAGACGGTCG TGCGAGAGGC GCTCACGCTG TAA
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Protein sequence | MSTLGFNTGY VEELYRQYLE NPESVSESWR EFFADYRPGE SFVAARETTQ APAEVPAAVG RPGGDGAAPE EAVSELAPEE VEEHPLRGPA ARIVENMEAS LKVPTATSVR TISVRLLAEN RALINDYQRH VGGEKVSFTH LIAWAVVQAL KAFPNMNSTF RRDDGTPIHV QPKTINLGIA IDLERRGKRM LLVPNIKHAD RMNFAQFLGA YNDIVARARD GRLDVSDFQG TTATITNPGM IGTVMSVPRL MAGQGVIVGV GAIGYPPEYA ALPSDMLSRL GLSQVMTITS TYDHRVIQGA ESGAFLAYID ELLQGQHEFY ERVFADLGIP YQPYRLAKDT TPLLGGLENG EELTMIQKQA AVLQLIRAYR VRGHLQADIN PLGYEWKYHP ELDPATYGLT IWDLDRQFVT GGLGGKDVAP LREILDILRQ TYTRKIGIEY MHISDPTERR WLQERIEPVR AADPISPDMR RRILQKLNAA EAFERFLHTK YIGHKRFSLE GAESLIPILD TILSDAADQE VEEVVIGMAH RGRLNVLANI LGKPYEVIFS EFEGNIDPNT TQGSGDVKYH LGAKGVHRSP SGNEVKITLA SNPSHLEAVD PVVEGMVRAK QDQLRRQRAE APGGDYYDAV IPILIHGDAA FAGQGVVAET LNLSQLRGYK TGGTIHIVVN NQIGFTTAPA DARSSTYATD IARMIQAPIF HVNGDDPEAC VRVARLALDY RQVFNKDVVI DLVCYRVHGH NEADEPTYTQ PLLYKKIAQK RSVRKLYTEM LLRRGDMTPE EAERMLDDYQ ARLQEAFERT KNLKERDPRE VVEQLRKKAE DDAPLPEVET AARREDLEAV VQALVNLPDG FHVHPKLERQ FKRRESLFFK EKKIDWAFAE ALAFGTLLLE GSPVRLSGQD SRRGTFSQRH AVLYDQETGE EYIPLNHIRE GQAELLIYDS LLSEYAVCGF EYGYSVASPE TLVLWEAQFG DFANGAQIVF DQFISAAEEK WGQQSGLVCL LPHGYEGQGP EHSSARLERF LQLCAQQNMI VGNLTTPANY FHVLRRQARM PVKKPLVLMT PKSLLRHPLA VSTPEELWSG RFREVYPAET DPAETRRLIF CSGKIYYDLL EVLLQDENLR RQIGLVRVEQ FYPFPKAAIQ AELERYRNVT DVVWVQEEPA NMGAWFYMQP RLNAMLEALH GDCNRRVRYV GRPASASPAT GSAKVHQVEQ ETVVREALTL
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