Gene Rmar_2338 details

Gene Information

• Locus tag: Rmar_2338
• ID: 8569003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2709814
• End bp: 2710410
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 67%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003291605
• Protein GI: 268317886

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCCTA CCGACGATCA ACTGGTCGCG GCCTACCTGG AGCGGGGCGA CGCGCAGGCG 
TTCCGCCGGC TGGTCGAGCG CCATCAGGAG CGGATCTACG GCTATCTGCT CGGGATGGTG 
CGCGACCCGG AGGTGGCCAG CGACCTGTTT CAGGAGACGT TTCTGCGTGT GCTGGCGGCA 
CTCCGTCAGG AGCGGGCCTC CTACACGCGC CAGGGACGCT GGCTGGCCTG GGTGCTGCGC 
ATTGCCCGCA ATGCGGCGCT CGATTACCTG CGCAGCCGAC GGCGCTGGCA GGACGTGACG 
CCGGACGACG GCGAAGAGGG CGGAAACTTC TGGGATCGGT TGCCGGACGA GGCGCCCGGC 
GCCGACGAGC TGCTGGAAGA AGCCGAGCTG CAGGAACGCC TGGCCGCCTG CATCGAACGC 
CTGCCGCCCG AGCAACGCGA GGTGCTGTTG CTGCGCCAGG AGGCGGAGCT GACCTTCCGG 
GAGATCGCCG AGCTGACCGG CGTCTCGATC AACACGGCGC TGGGACGCAT GCGCTACGCG 
CTGATCAATC TGCGCAAAAT GATGCTGCAG CCTCAGAAAC AACCGGCTTC GGAATGA 

 

Protein sequence

MHPTDDQLVA AYLERGDAQA FRRLVERHQE RIYGYLLGMV RDPEVASDLF QETFLRVLAA 
LRQERASYTR QGRWLAWVLR IARNAALDYL RSRRRWQDVT PDDGEEGGNF WDRLPDEAPG 
ADELLEEAEL QERLAACIER LPPEQREVLL LRQEAELTFR EIAELTGVSI NTALGRMRYA 
LINLRKMMLQ PQKQPASE