| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2329 |
|---|
| Symbol | |
|---|
| ID | 8568994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 2701963 |
|---|
| End bp | 2704209 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | protein serine phosphatase with GAF(s) sensor(s) |
|---|
| Protein accession | YP_003291596 |
|---|
| Protein GI | 268317877 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.681955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGCA ACGTGACGAT TCCTTCGCTG CAGCAGACGG AGATGCTGCT TCAGCAACGG
CGCACCCGCC TGTTTCTGCT GTTGCCGTTC TTCGGGACCG GCTACATTCT GTCGGTCGTC
TTCCATCTGC TGACCTGGAA GTCGGGCACG CCGCCCTCGA CCTGGGTCCG TCTGTTCTAC
TACGACGGGC TCATGCTGAT CACCTACGGC GCGTTGTGGC TGCTGCTCTG GGGCGAGACG
CACCAGCGCG GCACCTCCCC GACGCGCACG TTCTGGAGTC TGACCGTCGC CTCGCTGCTT
TTCCTGGGGC TTGGCTATCT GGTGCTGCGC ATCGGCCGTC CGTCCGGCGA TCTGGCTCTG
TCGGCGCCGG TCACCGGCTT CGCCTACGAG ACGGGCGTGC CGCTGACCTG GGCGGCCGTC
GTGCAGATGA ACGTGCTGGC CCTGCTCGAG GCGCTGCTGG CCTTCTGGCT GCTGCTGCAA
CTTCGGGGGC TGGTCCTGTT CAAACGCACG CGCCAGAGCG AGCGGAGCTG GCGCTGGATG
CTGATCACCA TGGCCGGCTC GGCCCTGCTG GTCGATCTGT TCCAGCCGGG CGAATTCGTG
CTGGCGCTGC TGCTGAGCCT GCCGGTCGGG CTCATGCTGC GCAATGCCTT TCGCGTCGCC
TGGATCCTGT ATCTCACCTT CCGCCAGAAG CTGCTGAACC TGGGGCTGAC CGTGCTGGCC
ACCGGCGCAC TGTCGGGCAC GCTGGCCTTT ACCAGCGGCC CGGCCCACGA ATACGTCTGG
CACTACAGCC CGGCCCTGAG CAGCTTTGTC AACCTGAGCC TGGCCTTTGG TATTCTCTAT
CTGGTCACCT CATTTCTGTC GCTGCTCTTT CACCTGCCCA CGACGGGCGC CTTTCAGCGG
AAGGTGGACG AACTGGCCGC GCTCCATGCG CTGATGCAGA TGGTCAGCCA GGTGTTCGAC
GTGGAGCGGC TGACCGAGAC GATCGTCCGG CTGCCGGTCG AAGCCGGCGT GGCGCAGGCC
GCCTGGCTGG CCCTGCCGGA CTTTCAGACG ACGTTCCGGC CCCGGATCGT GGCGGCTTAC
AACCTGCCGG AAGGTCAGAC CCCGGAGGCA CTCGTGGACA TCGAAGCGCT CTATCAGGAG
GTGGCTTCCC GGCGACAGTT TCTGCTGCTG GAGCAGGCGC TGACCGATCA CCGGGTGCGG
GCTCGGCCGG AGCACGGCAT CGGTAGCCTG CTGGTCGTGC CGCTGATTGC CCGCAACGAG
CTGCTGGGTG TGCTGTTCGT CACGCGCGAG GTGGCCTACG GCTTCGAGCA GGACGACGTC
GAGGCCATCT CGGTGTTTGC CACGCAGGCG GCCCTCGCCC TCGACAACGC CCGCCTGCTC
AGCGAACGTC TGGAAAAGGA ACGCCTGGCG CGCGAGCTGG CCATCGCACG CGACGTGCAG
CGCCGCCTGC TCCCCCAGCA ACTTCCCCGA CTTCCCGGCC TGCAGATCGT GGCCTCCAGC
GTCCCGGCCC AGGAAGTGGG CGGCGACTAC TACGACCTGC TCCAGCTCGA CAACCATCGG
CTGGCCTTCA TCGTGGCCGA CGTGGCCGGC AAGGGGACCT CGGCCGCCTT CTACATGGCC
GAACTGCAGG GCATCTTCCG GGCCCTGAGC CCGCTCAACC CCGATCCGGT GGTTTTTCTG
ACCCAGGCCA ACCAGGCGCT TTTCGAAACG CTGGAGCGTA AGGCGTTCAT TTCGGCCGTT
TATGGCGTGT TCGATGTGGC AAAAGGCACG GTGACGCTGG CCCGCGCCGG TCATCCGCCC
CCGATTCTCC TGCGCCCACA CGCACCGCCG CGTCTGCTTC GACTCCAGGG ATTGGGGCTG
GGACTGGACC GGGGCGAACT CTTTTGCCGC ACGCTGCAGC CCTGTACGCT CTCGCTCCAG
GCCGGCGACC GCCTGCTGCT GTACACCGAC GGTCTGATCG AAAGCCGCAA CGACCGAGGC
GAAGCCTTCG GCTACGATCG GCTGCTCCAG ACCCTCGAAG CGCACGCACG GGACACCGCC
GTGTCGTTGC ACCGCCATCT ACTCGAAGCG CTGGCGCAGT TTACCGGCCA TCCCGCCTAT
GATGACGACC TGACCCTTGT TATCTTCCAG TGGCAGGAAG TGCCGATGCT TCAGGAAGCG
CGGAACCGTC AGGACATGCA GGCGCAGACC GCCGGAGCGT CGGCCTCGAC CGCCCAACCC
TCGCAGCCTT CGAAGCAAGC GCCATGA
|
|---|
| Protein sequence | MIRNVTIPSL QQTEMLLQQR RTRLFLLLPF FGTGYILSVV FHLLTWKSGT PPSTWVRLFY
YDGLMLITYG ALWLLLWGET HQRGTSPTRT FWSLTVASLL FLGLGYLVLR IGRPSGDLAL
SAPVTGFAYE TGVPLTWAAV VQMNVLALLE ALLAFWLLLQ LRGLVLFKRT RQSERSWRWM
LITMAGSALL VDLFQPGEFV LALLLSLPVG LMLRNAFRVA WILYLTFRQK LLNLGLTVLA
TGALSGTLAF TSGPAHEYVW HYSPALSSFV NLSLAFGILY LVTSFLSLLF HLPTTGAFQR
KVDELAALHA LMQMVSQVFD VERLTETIVR LPVEAGVAQA AWLALPDFQT TFRPRIVAAY
NLPEGQTPEA LVDIEALYQE VASRRQFLLL EQALTDHRVR ARPEHGIGSL LVVPLIARNE
LLGVLFVTRE VAYGFEQDDV EAISVFATQA ALALDNARLL SERLEKERLA RELAIARDVQ
RRLLPQQLPR LPGLQIVASS VPAQEVGGDY YDLLQLDNHR LAFIVADVAG KGTSAAFYMA
ELQGIFRALS PLNPDPVVFL TQANQALFET LERKAFISAV YGVFDVAKGT VTLARAGHPP
PILLRPHAPP RLLRLQGLGL GLDRGELFCR TLQPCTLSLQ AGDRLLLYTD GLIESRNDRG
EAFGYDRLLQ TLEAHARDTA VSLHRHLLEA LAQFTGHPAY DDDLTLVIFQ WQEVPMLQEA
RNRQDMQAQT AGASASTAQP SQPSKQAP
|
|---|
| |