Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2319 |
Symbol | |
ID | 8568984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2689478 |
End bp | 2692798 |
Gene Length | 3321 bp |
Protein Length | 1106 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003291586 |
Protein GI | 268317867 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.300784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTCAC CAATCGATAG GGCAGTCATG GTACGCATGC TACGAGGTCT GGCCACCGGG CTGATGGTGG CATTGCTTTT GGGCACGAGC GCTCAGGCGC AGCGGATCAT CTACGTGAAA AAAGACGCGA CGGGGGCCAA CGATGGCAGT TCCTGGGCCG ATGCCTACAC GTCGCTCCAG GATGCGCTGG CGGCGGCGCA GGCAGGCGAT GAAATCTGGG TGGCGGCGGG GGTGTACTAC CCCGACGAGG GCACCGGGCT GACGGACAAC GACCGGACGC TGTCGTTCCA GATGAAAAGC GGCGTGGCCA TCTATGGCGG CTTCGCCGGC ACCGAAACCG ACCGCTCCCA GCGCGACTGG GAAGCCAACC CGACGGTGCT GAGCGGAGAT CTGGATCAGA ATGATATCGA TGCGGATGGG GATGGAAAAT ATGAACTTCT CCGTGGAAAT AATTCCTTGC ACGTTGTTTA TGTCGTAGCT GATTCTTTAG TATTAGATGG ATTTAAAATT AGTGGAGGAA TAGCTTCTGA TATTTCTGAT AATTGTGGGG GAGGCTTTTA TATACTTTCA TCAAGCAATG TTTTTTTGTA TAATTTGCAA ATTGAATTCA ATATGTCTGA TCAAAAAGGA GGGGGAATTT GTGTGTATAA TAGCAATATT GAAATTAAAA ATAGCAATAT CTATAGTAAC AAATCTGGGA TAGGAGGAGG TGTTTATGTG AATAGTAGTG GAGGTTTTAG TAGGTTTTAT AGTGTTATTA TTGAAAAAAA TATATCAAAT GTTGGGGCTG GAATATATGT TGATGGTTAC GAGGCATATC TATCTATAGA TGACGTTTAT TTTGTTCAAA ACGAAAAGGA TGCTTTGTTT TTCTCATTAG TGTACGGTTA TATGGATATA TTAAATAGTA AATTTGTACA CAATAAAGGA AGAAATATTT TTATGAGGGG GTGTAAAGAG TGTTCAATTT TGAATATTGA AATTGAATAT GGGTGGGGGA TTGATGTTTA TAGATCAAAT CTTGTGGTAA AAAATGCTGT TATTAATGAA TCCGGGATTG TTTTCGAGGA AAGTTCTGTC GTTGTAGATA GCGTTTATGT GTTTGGAGGT ATATCAGGGA TTAAGATTTT TGGGAGCGAA GCTGTTGTAA GCAATTCTAT AATAGCTCAC GTTGTGGGTC CTAAATATCA ACAATATTCT GGGCAATATA GTAGAGGCGG TGGGATCACT ATATCTGGGT CAGATCCAAT CTTATACAAC GTTGTTATTG CTAACAATGT TGCTGATTAT GGTGGGGGTA TATACGTAAA TAACGGAGAT CCTCAGTTTT TTAATGTATA TGTGTACAAT AATATGGCCA GATATGATGG TGGTGGGATG TATATTTATA AATCGAATGG AAGTATTGCT AAAAATATTA TCCTTTTTAA TAATAAAGCT GTATCTAGTG GTGGAGCAAT CTATGTCAAA GAAAGCAATT TTGTAGAATG GAATAATCTT TCTCTTATTC ATAATAATGC TGATCAAGGT GGAGGATTGT ACAGTGTTGA TAGTTTTATT GCATTAAATA ATAGTTTGTT TGCTAATAAT GTTGGTAAAG ATTGTATGGG TGTGCTTGAT TTAAGCTCAT CAAATAACGT GATCCAAGAT GTTGCCAGCG CCTGCGGCCT TCAGGACGGG CAGAATGGCA ACGTCATAGG GCGTGATGCG CGTCTGGTGG TGACGGACGA CTCGACGGGT ATTTACCGGC TTATTGCCGA CAGTCCGGCG CTGGATGCGG GAGACGACAG TGTGTGTCCG ACCGAGGACC TTCGGGGGGT GGAGCGGCCG CAGGATGGCG ACGAAGACGG CACGCCGCGG TGCGACATCG GCGCGCTGGA GTTCCTTCCG CAGGAGCTGC TGCATCTTCC CGTCGCCGTG GCGCCGGTCA GGCCGGTTTC CGGCGACACC CTGCGTCTGA GCCGAAGCGT GCTCGATACG CTGTGGGTAA GCTGGCCGCC TGCAACGGAT GCCGATGGCG ACGTCCTGGT CTATCGCTGG GAACTGGGGG ATACGTCGAT GCAGCACGTG TACCGCCGCG TGTGGGTGGG GACCGACACT TCGGTCGCCG TTTCGCATCA GGAATTGATC GCCCTGCTGG ATTCGCTGGG TGTATCGGTG GGAGAAGGAC GCTGGCTGGC CCATTGCGTC GTCGTGTGGG ACAGCACCAT GCTGGCCGGA GGAAAGCGGG CGGAAGTTGC AGGGACCGCC CAGCCATTGT TCCTGCAGAT TGAAAACAGT GTGCCGGCGT TGGCGGAGAT GCTGGAGCCG GCCGACGGAT CGGTGCTGGA GGTTGGTGCA GGAGGTGGCG ACACGTTGCG TGTGGTGTGG GGTGCGTCGT GGGACGCTGA TGGCGATGCG TTGCGGTACA GGTGGGAGTT GTCGCCGGAG GGGGATTTTG CTCGGGTTTG GCGTCGAGTG GAGACGGGGG ACACGTTGGT GGTGGTGTTG CCATCGGAGC TTTGGTCGCT GGCGGATTCG GTGGGTCTGG GTGTAGGGGA GCGGTTGGCG TTGTACCACC GGGTGGTGGT CAGCGATGGT CATACGGAGG TGTTGGGCGC GGCACGGCGG CTGGAGCTGG TTCGAAAGAA CAGTTTGCCG TCGCCGCCGG CCCTGGAACT TCCTGTGGTG TGGGAAGCGG TGCAGATTGC CGGGGAGCCC ACGGATACGT TACAGATTGT CTGGTGGGGC GTGCGTGACC CGGACGGCGA TCCGGTCTAT TACCGCTGGG AGCTGGCCCA CGACTCGCTG TTTGCGCAGG TACTTCGCCG CCGCGTGACC GGACGGGATA CCGTGGTTGG TCTCTCCTAT CGGGAACTGG CTGATCTGCT GGATTCGCTG GGCACGGCGC CGGGACAGCA GCAGCGGTTG TACCACCGCG TAGTCGCCAC CGACAGCAGC CGCGTCGAGG GCGGCGATGT GCGCGAAGTG GTGGGTCCGG CGGTGCCGCT GGTGCTGGTG CGGGGCCAAC TGACCGCGAC GGAGGGAGGG TTGCCCGATC GCATCGCCTT CCACGGGCAC TATCCCAACC CGGTGCGTGC GGGCGTCGTG GAGTTGCTGC TGGACCTTCC GGCTTCGTCG CAGGTGGCGG TGGAGGTGTA CGATATGCTG GGGCGGCTGG TGCGGCGCGT GCCGCGCTCG CGGCTGGAAG CAGGACGGGC ACGGCGCCTG CAGCTGGAAG TGGACGACCT GGCCGCCGGC ATGTACGTGT ACCGGGTGCT GGTAGCGTCG CCCGGCGGTA CGCACGAGGT GTTCTCGGGC CGGTTGGTCC GGGTGCGCTG A
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Protein sequence | MGSPIDRAVM VRMLRGLATG LMVALLLGTS AQAQRIIYVK KDATGANDGS SWADAYTSLQ DALAAAQAGD EIWVAAGVYY PDEGTGLTDN DRTLSFQMKS GVAIYGGFAG TETDRSQRDW EANPTVLSGD LDQNDIDADG DGKYELLRGN NSLHVVYVVA DSLVLDGFKI SGGIASDISD NCGGGFYILS SSNVFLYNLQ IEFNMSDQKG GGICVYNSNI EIKNSNIYSN KSGIGGGVYV NSSGGFSRFY SVIIEKNISN VGAGIYVDGY EAYLSIDDVY FVQNEKDALF FSLVYGYMDI LNSKFVHNKG RNIFMRGCKE CSILNIEIEY GWGIDVYRSN LVVKNAVINE SGIVFEESSV VVDSVYVFGG ISGIKIFGSE AVVSNSIIAH VVGPKYQQYS GQYSRGGGIT ISGSDPILYN VVIANNVADY GGGIYVNNGD PQFFNVYVYN NMARYDGGGM YIYKSNGSIA KNIILFNNKA VSSGGAIYVK ESNFVEWNNL SLIHNNADQG GGLYSVDSFI ALNNSLFANN VGKDCMGVLD LSSSNNVIQD VASACGLQDG QNGNVIGRDA RLVVTDDSTG IYRLIADSPA LDAGDDSVCP TEDLRGVERP QDGDEDGTPR CDIGALEFLP QELLHLPVAV APVRPVSGDT LRLSRSVLDT LWVSWPPATD ADGDVLVYRW ELGDTSMQHV YRRVWVGTDT SVAVSHQELI ALLDSLGVSV GEGRWLAHCV VVWDSTMLAG GKRAEVAGTA QPLFLQIENS VPALAEMLEP ADGSVLEVGA GGGDTLRVVW GASWDADGDA LRYRWELSPE GDFARVWRRV ETGDTLVVVL PSELWSLADS VGLGVGERLA LYHRVVVSDG HTEVLGAARR LELVRKNSLP SPPALELPVV WEAVQIAGEP TDTLQIVWWG VRDPDGDPVY YRWELAHDSL FAQVLRRRVT GRDTVVGLSY RELADLLDSL GTAPGQQQRL YHRVVATDSS RVEGGDVREV VGPAVPLVLV RGQLTATEGG LPDRIAFHGH YPNPVRAGVV ELLLDLPASS QVAVEVYDML GRLVRRVPRS RLEAGRARRL QLEVDDLAAG MYVYRVLVAS PGGTHEVFSG RLVRVR
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