Gene Rmar_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2319 
Symbol 
ID8568984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2689478 
End bp2692798 
Gene Length3321 bp 
Protein Length1106 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291586 
Protein GI268317867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.300784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCAC CAATCGATAG GGCAGTCATG GTACGCATGC TACGAGGTCT GGCCACCGGG 
CTGATGGTGG CATTGCTTTT GGGCACGAGC GCTCAGGCGC AGCGGATCAT CTACGTGAAA
AAAGACGCGA CGGGGGCCAA CGATGGCAGT TCCTGGGCCG ATGCCTACAC GTCGCTCCAG
GATGCGCTGG CGGCGGCGCA GGCAGGCGAT GAAATCTGGG TGGCGGCGGG GGTGTACTAC
CCCGACGAGG GCACCGGGCT GACGGACAAC GACCGGACGC TGTCGTTCCA GATGAAAAGC
GGCGTGGCCA TCTATGGCGG CTTCGCCGGC ACCGAAACCG ACCGCTCCCA GCGCGACTGG
GAAGCCAACC CGACGGTGCT GAGCGGAGAT CTGGATCAGA ATGATATCGA TGCGGATGGG
GATGGAAAAT ATGAACTTCT CCGTGGAAAT AATTCCTTGC ACGTTGTTTA TGTCGTAGCT
GATTCTTTAG TATTAGATGG ATTTAAAATT AGTGGAGGAA TAGCTTCTGA TATTTCTGAT
AATTGTGGGG GAGGCTTTTA TATACTTTCA TCAAGCAATG TTTTTTTGTA TAATTTGCAA
ATTGAATTCA ATATGTCTGA TCAAAAAGGA GGGGGAATTT GTGTGTATAA TAGCAATATT
GAAATTAAAA ATAGCAATAT CTATAGTAAC AAATCTGGGA TAGGAGGAGG TGTTTATGTG
AATAGTAGTG GAGGTTTTAG TAGGTTTTAT AGTGTTATTA TTGAAAAAAA TATATCAAAT
GTTGGGGCTG GAATATATGT TGATGGTTAC GAGGCATATC TATCTATAGA TGACGTTTAT
TTTGTTCAAA ACGAAAAGGA TGCTTTGTTT TTCTCATTAG TGTACGGTTA TATGGATATA
TTAAATAGTA AATTTGTACA CAATAAAGGA AGAAATATTT TTATGAGGGG GTGTAAAGAG
TGTTCAATTT TGAATATTGA AATTGAATAT GGGTGGGGGA TTGATGTTTA TAGATCAAAT
CTTGTGGTAA AAAATGCTGT TATTAATGAA TCCGGGATTG TTTTCGAGGA AAGTTCTGTC
GTTGTAGATA GCGTTTATGT GTTTGGAGGT ATATCAGGGA TTAAGATTTT TGGGAGCGAA
GCTGTTGTAA GCAATTCTAT AATAGCTCAC GTTGTGGGTC CTAAATATCA ACAATATTCT
GGGCAATATA GTAGAGGCGG TGGGATCACT ATATCTGGGT CAGATCCAAT CTTATACAAC
GTTGTTATTG CTAACAATGT TGCTGATTAT GGTGGGGGTA TATACGTAAA TAACGGAGAT
CCTCAGTTTT TTAATGTATA TGTGTACAAT AATATGGCCA GATATGATGG TGGTGGGATG
TATATTTATA AATCGAATGG AAGTATTGCT AAAAATATTA TCCTTTTTAA TAATAAAGCT
GTATCTAGTG GTGGAGCAAT CTATGTCAAA GAAAGCAATT TTGTAGAATG GAATAATCTT
TCTCTTATTC ATAATAATGC TGATCAAGGT GGAGGATTGT ACAGTGTTGA TAGTTTTATT
GCATTAAATA ATAGTTTGTT TGCTAATAAT GTTGGTAAAG ATTGTATGGG TGTGCTTGAT
TTAAGCTCAT CAAATAACGT GATCCAAGAT GTTGCCAGCG CCTGCGGCCT TCAGGACGGG
CAGAATGGCA ACGTCATAGG GCGTGATGCG CGTCTGGTGG TGACGGACGA CTCGACGGGT
ATTTACCGGC TTATTGCCGA CAGTCCGGCG CTGGATGCGG GAGACGACAG TGTGTGTCCG
ACCGAGGACC TTCGGGGGGT GGAGCGGCCG CAGGATGGCG ACGAAGACGG CACGCCGCGG
TGCGACATCG GCGCGCTGGA GTTCCTTCCG CAGGAGCTGC TGCATCTTCC CGTCGCCGTG
GCGCCGGTCA GGCCGGTTTC CGGCGACACC CTGCGTCTGA GCCGAAGCGT GCTCGATACG
CTGTGGGTAA GCTGGCCGCC TGCAACGGAT GCCGATGGCG ACGTCCTGGT CTATCGCTGG
GAACTGGGGG ATACGTCGAT GCAGCACGTG TACCGCCGCG TGTGGGTGGG GACCGACACT
TCGGTCGCCG TTTCGCATCA GGAATTGATC GCCCTGCTGG ATTCGCTGGG TGTATCGGTG
GGAGAAGGAC GCTGGCTGGC CCATTGCGTC GTCGTGTGGG ACAGCACCAT GCTGGCCGGA
GGAAAGCGGG CGGAAGTTGC AGGGACCGCC CAGCCATTGT TCCTGCAGAT TGAAAACAGT
GTGCCGGCGT TGGCGGAGAT GCTGGAGCCG GCCGACGGAT CGGTGCTGGA GGTTGGTGCA
GGAGGTGGCG ACACGTTGCG TGTGGTGTGG GGTGCGTCGT GGGACGCTGA TGGCGATGCG
TTGCGGTACA GGTGGGAGTT GTCGCCGGAG GGGGATTTTG CTCGGGTTTG GCGTCGAGTG
GAGACGGGGG ACACGTTGGT GGTGGTGTTG CCATCGGAGC TTTGGTCGCT GGCGGATTCG
GTGGGTCTGG GTGTAGGGGA GCGGTTGGCG TTGTACCACC GGGTGGTGGT CAGCGATGGT
CATACGGAGG TGTTGGGCGC GGCACGGCGG CTGGAGCTGG TTCGAAAGAA CAGTTTGCCG
TCGCCGCCGG CCCTGGAACT TCCTGTGGTG TGGGAAGCGG TGCAGATTGC CGGGGAGCCC
ACGGATACGT TACAGATTGT CTGGTGGGGC GTGCGTGACC CGGACGGCGA TCCGGTCTAT
TACCGCTGGG AGCTGGCCCA CGACTCGCTG TTTGCGCAGG TACTTCGCCG CCGCGTGACC
GGACGGGATA CCGTGGTTGG TCTCTCCTAT CGGGAACTGG CTGATCTGCT GGATTCGCTG
GGCACGGCGC CGGGACAGCA GCAGCGGTTG TACCACCGCG TAGTCGCCAC CGACAGCAGC
CGCGTCGAGG GCGGCGATGT GCGCGAAGTG GTGGGTCCGG CGGTGCCGCT GGTGCTGGTG
CGGGGCCAAC TGACCGCGAC GGAGGGAGGG TTGCCCGATC GCATCGCCTT CCACGGGCAC
TATCCCAACC CGGTGCGTGC GGGCGTCGTG GAGTTGCTGC TGGACCTTCC GGCTTCGTCG
CAGGTGGCGG TGGAGGTGTA CGATATGCTG GGGCGGCTGG TGCGGCGCGT GCCGCGCTCG
CGGCTGGAAG CAGGACGGGC ACGGCGCCTG CAGCTGGAAG TGGACGACCT GGCCGCCGGC
ATGTACGTGT ACCGGGTGCT GGTAGCGTCG CCCGGCGGTA CGCACGAGGT GTTCTCGGGC
CGGTTGGTCC GGGTGCGCTG A
 
Protein sequence
MGSPIDRAVM VRMLRGLATG LMVALLLGTS AQAQRIIYVK KDATGANDGS SWADAYTSLQ 
DALAAAQAGD EIWVAAGVYY PDEGTGLTDN DRTLSFQMKS GVAIYGGFAG TETDRSQRDW
EANPTVLSGD LDQNDIDADG DGKYELLRGN NSLHVVYVVA DSLVLDGFKI SGGIASDISD
NCGGGFYILS SSNVFLYNLQ IEFNMSDQKG GGICVYNSNI EIKNSNIYSN KSGIGGGVYV
NSSGGFSRFY SVIIEKNISN VGAGIYVDGY EAYLSIDDVY FVQNEKDALF FSLVYGYMDI
LNSKFVHNKG RNIFMRGCKE CSILNIEIEY GWGIDVYRSN LVVKNAVINE SGIVFEESSV
VVDSVYVFGG ISGIKIFGSE AVVSNSIIAH VVGPKYQQYS GQYSRGGGIT ISGSDPILYN
VVIANNVADY GGGIYVNNGD PQFFNVYVYN NMARYDGGGM YIYKSNGSIA KNIILFNNKA
VSSGGAIYVK ESNFVEWNNL SLIHNNADQG GGLYSVDSFI ALNNSLFANN VGKDCMGVLD
LSSSNNVIQD VASACGLQDG QNGNVIGRDA RLVVTDDSTG IYRLIADSPA LDAGDDSVCP
TEDLRGVERP QDGDEDGTPR CDIGALEFLP QELLHLPVAV APVRPVSGDT LRLSRSVLDT
LWVSWPPATD ADGDVLVYRW ELGDTSMQHV YRRVWVGTDT SVAVSHQELI ALLDSLGVSV
GEGRWLAHCV VVWDSTMLAG GKRAEVAGTA QPLFLQIENS VPALAEMLEP ADGSVLEVGA
GGGDTLRVVW GASWDADGDA LRYRWELSPE GDFARVWRRV ETGDTLVVVL PSELWSLADS
VGLGVGERLA LYHRVVVSDG HTEVLGAARR LELVRKNSLP SPPALELPVV WEAVQIAGEP
TDTLQIVWWG VRDPDGDPVY YRWELAHDSL FAQVLRRRVT GRDTVVGLSY RELADLLDSL
GTAPGQQQRL YHRVVATDSS RVEGGDVREV VGPAVPLVLV RGQLTATEGG LPDRIAFHGH
YPNPVRAGVV ELLLDLPASS QVAVEVYDML GRLVRRVPRS RLEAGRARRL QLEVDDLAAG
MYVYRVLVAS PGGTHEVFSG RLVRVR