Gene Rmar_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2316 
Symbol 
ID8568981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2684455 
End bp2687055 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291583 
Protein GI268317864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.824305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTCA TGGTCAGCCT GCTGGGCCTG GCGGGGGCGG TCCGGGCCCA GCCGGTCGTT 
TATCAGGAAG TGCCACTCCG CCAGGTGCTC GACGACGTGG CCCGGCGCAG CGGCTATCAG
GTGCTCTATC GCGACGCGCT CGTCGAAGGG CGCACCGTCA CGCTGCAGAC GACCGAGTCC
CATCTCATCG AAGCACTCAC GCGCGAGCTG GCCCGGCAGG GGCTTGTCCT GGAGGCCGAC
ACGGCGCGGC GCCAGCTTTT ATTGCTGGAA GCCCCCTCGC GCAACGTCTC GATCGAGGGG
CAGGTGCGCG ATGCGGCGAC CGGGCTGCCG CTGCCCTACG CGACGGTTTC CTGGTGGGCG
AACGGTCGGC TGTGGGGCAC TATGGCCGAT GCCGAAGGGC GGTTTGTCGC GACGGTAGCA
CTGCCGGCCG CATGCGATAC GCTGACGCTG ACCGCCTCGT ATGTGGGCTA CGAATCGCAA
ACCATTTCGC TGGCCGTGCG CGAAACGACG CGGCCGCTGC GGCTCGCGCT CGCGCCCCGG
ACCGAGGCGC TTCCCGCCGT GCTCATCGTG GGAAGCGCCG CCTGGCTCGA CGGGATCGAT
ACCACCTGGC AGCGGCTGGT GCAACCCGCA CGGTTCGCGC CGTTCGGCGA GCGCGGCGTG
CTCCGGGCGC TCCAGGCGCT GCCAGCCGTC GGGCTGGCCA TCGGGCTCGA CGGCCTGACC
GTGCGGGGTA GCCAGACCGA CGGCTTCCAG GTACTGCTCG ACGGCGTGCC CGTCTATCAT
CCTTCGCATC TGTTTGGCCT GTTCGACGCC TTCAACCCGG ACGCCCTCCA GGCGGTCGGT
TTCTTCTACG ACGTGGCGCC GGCCACTTAC GCGGCCCCGC CCGGAGGGAC GCTTGCCTTC
GTGACGCGCA GCGGCAGCTA CCAGCGCCCT CAGAGCGTGG CCGGCGTGAG CAACGTGGCC
GGGCGCCTGC TGCTGGAAGG ACCGCTGGGC CGTTCGGGAA GCTGGCTGCT GGCCGGACGC
CGCTCGCTGC TCGATGCACT CGCCTGGCCC GGCAACGACC GACTCGTGGC GTTCGGGCTC
GACGTGGCAC GCCCCACCGG ACCCCTTCCC CCGAACGTGG CCGATCTGGA GGCCCGTCTG
CTGGAGCTGG GCCCCTCGGC CGCTACGTTT TACGATCTGC ACGGCAAGCT TCGGCTCGAA
GGCGGGCCGG TGCGCCTGAC GCTGAGCGGC TACCTGGGCG GGGACGATGC CCGCCAGCAG
GCCCAGCGCC TGATGCCGCG CTGGGATGCG CGCCCCTCCG ATTTTGAATG GATGGACGTC
GAAACCCGGC AGCGCTGGAC CAACCGCACG GCCAGCGCCC GGCTCACCTA CCGAATGGGC
GCGGCGTTAC ACCTGGAGAC GCTGCTGGCA ACCACCGCCT ACGAGAGCCG CTACACGAAG
GACGACTTCC TGTACGCTTT TACCGGGGGC GGCCTTCAGA AGCTGTTTCG GCGGCTGGCG
CCGTTCGCTT ACACGAACGC CCTGACCGAG TGGCGCTGGG AGCAGGCCTT ACAGGTGGCG
CAAGAGGCCG GCTACTGGAC GCTGGGCTAC ACGCTGCAAC ACCTGGACCT TTCGTACGAA
GAACATTCGG CCGTTCGGCC TCGTCCCTTC GCGGAAAAGC AGCGGGCGGT CCAGACGGAC
GCCTTTCTGC AGTACGAAGG ACGCACAGGT GCCCTGTTGA AGGTGCTGGC CGGGCTTCGG
CTCCATGCCT TCTCGACAGG CCCGTACGTC CGTCTTTCGC CCCGTCTTCA GCTGACGCTG
CACCCCGAAG GCCAGTGGTC GGCCGGCGTC GGCTTCAGCC GGAACTATCA GTTTCTGCAC
CACCTGGCCT TCGAAAACAT GAACAGCACG GGCATCTGGC TGCTGACCGG GCGGAATCAG
CCGCCGACCG TGGTGGACAA CATGAGCGCA GGCGTGCAGC TCCGGCCGGG ACGCACGCGT
CTGCAGCTTG ACGCTTACGC CCGTCGCTTT GCGAACGTAT GGCAGCACGA GGTCGTGGCG
CCTTTCTTCC TGATCACGCG CGACCCCGAA ACGACGACGC CCTGGCTTAC CGGCGCGCGC
AGCCGGGCCT ACGGGCTGGA GATGCTGCTG GATCAGCCGC TCGGGCCACT CCGGGCCACG
CTGGCCTATG CGCTGAGCCG GGTTGACCTG GCCCACGACG CGCTGAACGG CGGCGCCTGG
TATCCGGCCC CCTGGGACCG GCGTCACCAG CTTCGGGCAT ATCTGGACGT GCCGCTCTGG
CCGGGCAGCG CGCTTACGGT GGCCTGGTTT TCGGCGTCCG GCCCCCCCAA CACCGAGCGC
TATACAGATC TGGCGCAACC GGAACGACTG GGCCCCTACC ATCGCATGGA CCTGACGCTG
ACGACCCGCT ACCGGACGCC CTTTGCCACG GCCGAGCTAC GGCTGGGCCT GTTCAACCTG
TTCGATCGGG CCAATCCCTG GTATCGCGCG CCCGTGCTCG TGCTGGTCGG CGAGCGCCTG
CCCCGGCGTT TCGCCTTCGC GCCGGTCGAC GTGTACGACC TGGGCCGCCA GGCTTCGTTC
GAGCTGGTGC TGCATTTCTG A
 
Protein sequence
MILMVSLLGL AGAVRAQPVV YQEVPLRQVL DDVARRSGYQ VLYRDALVEG RTVTLQTTES 
HLIEALTREL ARQGLVLEAD TARRQLLLLE APSRNVSIEG QVRDAATGLP LPYATVSWWA
NGRLWGTMAD AEGRFVATVA LPAACDTLTL TASYVGYESQ TISLAVRETT RPLRLALAPR
TEALPAVLIV GSAAWLDGID TTWQRLVQPA RFAPFGERGV LRALQALPAV GLAIGLDGLT
VRGSQTDGFQ VLLDGVPVYH PSHLFGLFDA FNPDALQAVG FFYDVAPATY AAPPGGTLAF
VTRSGSYQRP QSVAGVSNVA GRLLLEGPLG RSGSWLLAGR RSLLDALAWP GNDRLVAFGL
DVARPTGPLP PNVADLEARL LELGPSAATF YDLHGKLRLE GGPVRLTLSG YLGGDDARQQ
AQRLMPRWDA RPSDFEWMDV ETRQRWTNRT ASARLTYRMG AALHLETLLA TTAYESRYTK
DDFLYAFTGG GLQKLFRRLA PFAYTNALTE WRWEQALQVA QEAGYWTLGY TLQHLDLSYE
EHSAVRPRPF AEKQRAVQTD AFLQYEGRTG ALLKVLAGLR LHAFSTGPYV RLSPRLQLTL
HPEGQWSAGV GFSRNYQFLH HLAFENMNST GIWLLTGRNQ PPTVVDNMSA GVQLRPGRTR
LQLDAYARRF ANVWQHEVVA PFFLITRDPE TTTPWLTGAR SRAYGLEMLL DQPLGPLRAT
LAYALSRVDL AHDALNGGAW YPAPWDRRHQ LRAYLDVPLW PGSALTVAWF SASGPPNTER
YTDLAQPERL GPYHRMDLTL TTRYRTPFAT AELRLGLFNL FDRANPWYRA PVLVLVGERL
PRRFAFAPVD VYDLGRQASF ELVLHF