Gene Rmar_2293 details

Gene Information

• Locus tag: Rmar_2293
• ID: 8568958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 2657819
• End bp: 2658535
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 69%
• Product: protein of unknown function DUF542 ScdA domain protein
• Protein accession: YP_003291560
• Protein GI: 268317841

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00571035
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGAGC TTTTAAGCAA GACGCTTGGC GAGCTGGTGG CCGCCGACGA GCGGCGGGCG 
GCCCTTTTTG ATCGGCTGGG CCTGGACTAC TGCTGCGGCG GCAGCCGTAC GCTGGAGGCC 
GCCTGCCGGG AGCGCGGGCT GGATCCGGCC ACGGTGGCGG CCGTGCTGGA CGCCCTGGAA 
GCGACCGAAG CGGCCGACGA ACCCGCCGTC GACTGGCGCA CGCGTTCGCT GGCCGACCTG 
ATCGACCATA TCGTCGCGAC GCACCATGCG TACCTGCGCC GAGAATTGCC GCGGCTGAGT 
GCGCTGATCG ATCGCGTGGC GCAGGTGCAC GGCCACCAGA GCCCCTGGCT GCACGAAGCC 
CGTGCAGTCT TCGGGCGGCT GAAGCTGGAG CTGGAGGCCC ACATGCGCAG CGAGGAAGAA 
GCGATCTTTC CGCTGATCCG GGCGCTGGAG GAGGGTTCGG CCGATGCCGC GGCCGAGCTG 
GAGCCGCTGC TCGCGCAGGC CGAACAGGAG CACGACGCAG CCGGCGAGGC GCTGCACCGG 
TTGCGGGCAC TCTCCGACAA CTATCGGCCG CCCGAATGGG CCTGCAGCAG CTTCCGGGCG 
CTTCTGGAAG GACTCCAGGC GCTCGAAGCC GACATGCACC GCCACGTGCA TCGGGAAAAC 
AACGTCCTGT TTCCCCGCGC GCGTCGCCTG CTGCAAACTG GCATAGCTGC ATCATGA 

 

Protein sequence

MSELLSKTLG ELVAADERRA ALFDRLGLDY CCGGSRTLEA ACRERGLDPA TVAAVLDALE 
ATEAADEPAV DWRTRSLADL IDHIVATHHA YLRRELPRLS ALIDRVAQVH GHQSPWLHEA 
RAVFGRLKLE LEAHMRSEEE AIFPLIRALE EGSADAAAEL EPLLAQAEQE HDAAGEALHR 
LRALSDNYRP PEWACSSFRA LLEGLQALEA DMHRHVHREN NVLFPRARRL LQTGIAAS